Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0559 ATGAGCCTCATGCATGCGTGTGTCAACAACCCTACAGCCCCAATGAGCAGTTTCAGCTTCGCCGGCTTCTACGAATCGTGGTTCGACCACCTTCACCACCTCCTTCACCAGCTCTCCGCCGCCACGCGACCACCCAGCACGCCGGAGGAAAACCACAAGCTCCTCATCCTAATCGACAAGGTGATGGCCCACTACGACGATTACTACCGCACCAAGTCCGTCGCCTCCCAGAACGATCCCTTGCAAATGCTCGTCTCCCCCTGGGCCACCACCCTTGAACGCTCCCTTCACTGGATCGCCGGCTGGCGCCCCACCATCGCCTTCCACCTCGTCTATACCGAGTCCTCTGTCCTCTTCGAGTCCCATATCATTGACATCCTCCGTGGGGTTCGTACCGGCGACCTCGGCGATCTCTCCCCCTCTCAGTTCCGGCGAGTCAGCCAATTGCAATGTGACACCGTGAAGGAAGAGAATGCGATAACGGAGGAGCTATCGGAGTGGCAAGACAGCGGGAGCGAACTGATAGAAGGGGTGGCGGAGATGGAGGAGAAGATGGAGGCTCTAGGGAGAATCATAAGGAAGGCGGACGATCTCCGGCTGAGAACCCTAAAGAGCGTGATGGGTCTCCTCACTCCACAGCAAGCCGTCGACTTCTTGATTGCCTCCGCCGAGTTGCTCTCCGGCATCCGCTCTTGGGGAATCAATCACGACCGTCGACGATCCAGATAA 729 0.5816 MSLMHACVNNPTAPMSSFSFAGFYESWFDHLHHLLHQLSAATRPPSTPEENHKLLILIDKVMAHYDDYYRTKSVASQNDPLQMLVSPWATTLERSLHWIAGWRPTIAFHLVYTESSVLFESHIIDILRGVRTGDLGDLSPSQFRRVSQLQCDTVKEENAITEELSEWQDSGSELIEGVAEMEEKMEALGRIIRKADDLRLRTLKSVMGLLTPQQAVDFLIASAELLSGIRSWGINHDRRRSR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0559 242 Coils Coil 178 198 - -
Lele10g0559 242 Pfam Seed dormancy control 35 113 IPR025422 GO:0006351|GO:0043565
Lele10g0559 242 ProSiteProfiles DOG1 domain profile. 17 239 IPR025422 GO:0006351|GO:0043565
Lele10g0559 242 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 19 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0559 Lele-ChrLele10 4084080 4084901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0559 11 221 bZIP Transcription Factor Family AT5G06960 25.877 1.67e-17 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0559 10 4084080 4084901 Lele10g0559 10 4084080 4084901 ECH
Lele10g0559 10 4084080 4084901 Lele12g0714 12 15314567 15315385 hybridization