Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0546 ATGGCCGCGAAGATTTTCGCTGGTCTCAGAACGTATGGCAACTACAAGCTCCCTAAGCACTGCGACAACAATGAGGTGCTCAAGGCTCTCTGCAACGAGGCTGGCTGGACTGTTGAACCCGACGGCACCACTTACCGCAAGTTCGTCGCTGTGCTTGTTGCAACATGGCAGAAGCTTTTACAGACATCGCATGACTCGAGCAACTCTTTTGTCTTTGGTGAATGCATAGTATCGGAGCCTGAAGATAATAACTGGGGATGTAAGCCTGTAGAACGTATGGATGTGGTTGGTGGTTCTGCAGCAGCGAGCCCATGTTCATCTTACCATCTAAGTCCCTGTGCTTCCTACAACCCAAGCCCTGGCTCTTCTTCCTTCCCAAGCCCACGCTCATCGGCCTATGCAGCAACTCCTAATGGTGATGGCAATTCCCTAATTCCATGGCTAAAAACTCTCTCATCTGGATCATCTTCAGCATCCTCTTCAAAGCTCCCCCATCTCTACATTCATAGTGGCTCCATCAGTGCTCCTGTCACTCCTCCTCTGAGCTCCCCAACTGCCCGAATACCCCGAACCAAAGGTGAATGGGATGATCAGTCCACTCGTCCTGGGTGGGTTGGGCAGCAGTATTCGTTTCTGCCCTCCTCAACTCCTCCAAGCCCTGGTCGCGAGGTTGATAACCCAGAATGGTTTGCTGGTATTAGGGTTCCCCAGGGTGGGCCTAACTCTCCAACCTTCAGCTTGGTCTCTTCAAACCCCTTTGGCTTCAAAGAAGATGTTCTAGCTAGCAGTGGTTCGCGAATGTGGACTCCTGGGCAAAGTGGGACATGTTCTCCAGCCATAGCAGCAGGCTCTGATCACACTGCTGACATTCCCATGGCTGAAGTGGTTTCAGAAGAATTTGCCTTTGGGAGTAACACAACAGGCTTTGTGAAGCCATGGGAAGGAGAGAGGATCCATGAAGATAGCGGATCAGATGATCTTGAACTCACTCTTGGGACCTCAAAAACCAGGTGA 1014 0.5118 MAAKIFAGLRTYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKFVAVLVATWQKLLQTSHDSSNSFVFGECIVSEPEDNNWGCKPVERMDVVGGSAAASPCSSYHLSPCASYNPSPGSSSFPSPRSSAYAATPNGDGNSLIPWLKTLSSGSSSASSSKLPHLYIHSGSISAPVTPPLSSPTARIPRTKGEWDDQSTRPGWVGQQYSFLPSSTPPSPGREVDNPEWFAGIRVPQGGPNSPTFSLVSSNPFGFKEDVLASSGSRMWTPGQSGTCSPAIAAGSDHTADIPMAEVVSEEFAFGSNTTGFVKPWEGERIHEDSGSDDLELTLGTSKTR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0546 337 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 2 337 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lele10g0546 337 MobiDBLite consensus disorder prediction 315 337 - -
Lele10g0546 337 MobiDBLite consensus disorder prediction 178 204 - -
Lele10g0546 337 Pfam BES1/BZR1 plant transcription factor, N-terminal 2 152 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0546 Lele-ChrLele10 4006906 4010645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0546 6 337 BZR Transcription Factor Family AT1G78700 60.819 2.52e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele10g0546 BES1_N 2e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0598 09 4567958 4572364 Lele10g0546 10 4006906 4010645 ECH
Lele10g0546 10 4006906 4010645 Lele10g0546 10 4006906 4010645 ECH
Lele10g0546 10 4006906 4010645 Lele11g0608 11 5959836 5963769 hybridization
Lele10g0546 10 4006906 4010645 Lele12g0728 12 15410568 15414132 hybridization