Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0543 ATGGAGTTTCGACCCCTCTTCTTCAAACCCAACCTTCCTGGTCTGCTAATGGAGTTTGCCATGTCAAGCCCCAAACTTCTCTCTGTTTTTTTCTTCGGATTTCTGCTTCTCTGTTTCTTCTCAGTTTCTCCTTCAAACGCTCAACTTATACCCCAGGACGAAGTAAATGCTCTACAGGCAATATCTGATAAACTGACAAATGTGAATTGGAAGGTGACGCAAACATCTTGTAGAACAGGGGATGGATTTAATATCCTGACTGAATCTTCTGAAGTAACCAGGAATGTCACTTGCGATTGCACCCTCCAAAACGGCGCCGTTTGCCATGTCACTCATGTTCTGTTGAAAAGCCTGAACATAGCAGGAGAAATACCCAGTGAATTTGGGAATCTTACACAATTGATTGAACTTGATCTCAGTCGCAACTATCTCAGTGGCACAATCCCGACAGTTTTTACGCGCATCCCTCTTGTCATTCTGTCCCTTTTGGGGAATCGCATTAATGGTTCGATTCCTGCAGAATTGGGTGAAATTGCTACTCTGCAGGAGCTGGTTTTAGAAAATAATCAGCTTGAAGGACATCTTCCTCAGAGTCTTGGAAATTTGAGCAACCTACGGAGATTACTTCTTTCTGCAAATAATTTTACCGGGACAATACCAGAAACGTTTGGAAATCTAAAGAACCTAACTGATTTTAGGATAGATGGAAGCAGTTTATCAGGGAAGATACCTAGTTTTATTGGGAACTGGACCAAAATTAGTATTCTGAATATGCAGGGCACAGGCATGGAAGGTCCAATTCCTCCCACCATATCCTTGTTTACAAACTTGACAGAATTGAGAATATCGGACTTGAGTGGAACAACAACCATGACATTTCCTGATCTCAAGGATTTGAAGATTTTAAAGCTACTGATATTGAGAAATTGCCTAATTGTTGGTCCTATTCCAAATGACTTCAAGGAAATGACGGAATTAAGGACTCTAGACCTGAGCTTTAACAGGTTGACTGGTTCAATCCCTGTTTCGTTTGAGGACTTGAAATTTAATTACATGTTTCTGACGAACAATTCTCTGAGCGGATTAATTCCAGGGTGGATGACAGTGAACAAAGAAAATATTGATTTATCTTACAACAATTTTACCGAGGCTTCTGCAACTACTTGCCAGCAGTCGAAAGTGAACTTGGCTTCTAGTCTCTCATCTTCTGCGAGCAATTCACTCATGTGTTTGAAGAAGGGCCTACCTTGTGAGGGAAAACCAAAATATTATTCGTTGTTCATAAACTGTGGAGGAGGCCATATGGAGTTTGACGGTCATGAATATGAGCAAGATTTATCTCGAGATGGCATTTCATACTTTAATCTTCAAAACAACTGGGCTTATAGCAGCACAGGCGTATATATGGGCAATGATAGTGCTGATTTTGTAGCAACAAGACCATCTCCGTTGAATGTCAGTAGCCCAGCATACTACCAAACAGCGCGGCTTAGCCCTCTATCCCTTAAGTACTATGGCCTCTGTATGATGAAGGGCAATTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTATTCTGATGACCAGACTTATAGCAGCCTTGGTAGACGCATATTTGATGTTTCAATTCAAGGTGTTAAATACTTGAAAGATTTGAACATTGCGGAGAAAGCAGGTGGAGTTAGTAAGGGCATCACAATGGAATATGATGTTGATGTGAATGATAGCACCTTGGAGATCCATTTGTACTGGGCGGGGAAAGGAACTACCGCGATTCCAAATAGAGGTGTCTATGGACCTCTAATATCTGCTATCACTGTGACCCCAAACTTCAAAGTTCCTTCAAAAGGGTTGTCCACTGGAGCTATTGTTGGAATTGTGGTTGGATCATGTGTTTTCCTTGTATTGGTACTCATTGTCCTCCGAAAGAAGGGTTTCCTTGGTGGGAAAGATCCACAAGACACAGAACTTTTAGATCTTAACACGGGATATTTTTCTCTAAGACAAATTAAAACAGCCACCAACAACTTTGACCCAGCAAATAAGATAGGAGAAGGAGGATTTGGGCCCGTGTTTAAGGGTGTGCTGTCGGATGGTGTAGTCATTGCTGTTAAGCAGCTCTCATCCAAGTCGAAGCAAGGGAATCGTGAATTTGTTAATGAGATAGGAATGATCTCTGCATTGCAACATCCGAATCTTGTGAAGCTTTATGGTTGTTGCATAGATGGAAATCAACTAATGCTTATATATGAATACATGGAGAATAATAGTCTTGCCCGAGCACTTTTTGGCCGTGAAGAACAGAGGATACATTTGGATTGGCCCACAAGATTGAAGATTTGTCAGGGGATAGCAAGGGGGTTAGCTTATCTTCACGAGGAGTCAAGATTGAAAATAGTACATAGGGACATTAAGGCAACAAACGTCTTACTTGATAAGCATCTAAATGCCAAAATTTCCGACTTTGGTCTAGCCAAGCTTGATGAAGAAGAGAACACGCATATCAGCACCCGAATAGCTGGAACAATTGGTTACATGGCCCCTGAATATGCAATGAGAGGTTATTTGACAGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTGGAGATTGTTAGTGGAAAGAGCAACACGAATTACCGGCCAAAGGATGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTCCAAGAGCAAGGAAATCTTCTGGAACTAGTTGATCCGTATCTTGGTTCAAGCTACTCCCAAGATGAGGCCATGAGAATGCTCAACTTGGCTCTTCTGTGCACCAACCCATCTCCCACCCTCAGACCAGCCATGTCATCTGTAGTGAGCATGCTTGAAGGAAATATTCCAATTCAAGCTCCAATAATCAAGCGCAAAGATGCAAGCCAGGATGCAAGGTTCAAAGCCTTTGAGATGCTATCACATGACAGCCAAACGTCTATAGCCTCTCAAACAAGCATGGAGCAAAGAGGCAAGTCAATGGATGGGCCATGGATTGATTCCTCAATATCTCTTCCAAGTGGAGATGATTATTCTTCATCTAGGAAGCTTCTTTGA 3066 0.4172 MEFRPLFFKPNLPGLLMEFAMSSPKLLSVFFFGFLLLCFFSVSPSNAQLIPQDEVNALQAISDKLTNVNWKVTQTSCRTGDGFNILTESSEVTRNVTCDCTLQNGAVCHVTHVLLKSLNIAGEIPSEFGNLTQLIELDLSRNYLSGTIPTVFTRIPLVILSLLGNRINGSIPAELGEIATLQELVLENNQLEGHLPQSLGNLSNLRRLLLSANNFTGTIPETFGNLKNLTDFRIDGSSLSGKIPSFIGNWTKISILNMQGTGMEGPIPPTISLFTNLTELRISDLSGTTTMTFPDLKDLKILKLLILRNCLIVGPIPNDFKEMTELRTLDLSFNRLTGSIPVSFEDLKFNYMFLTNNSLSGLIPGWMTVNKENIDLSYNNFTEASATTCQQSKVNLASSLSSSASNSLMCLKKGLPCEGKPKYYSLFINCGGGHMEFDGHEYEQDLSRDGISYFNLQNNWAYSSTGVYMGNDSADFVATRPSPLNVSSPAYYQTARLSPLSLKYYGLCMMKGNYKVKLHFAEIMYSDDQTYSSLGRRIFDVSIQGVKYLKDLNIAEKAGGVSKGITMEYDVDVNDSTLEIHLYWAGKGTTAIPNRGVYGPLISAITVTPNFKVPSKGLSTGAIVGIVVGSCVFLVLVLIVLRKKGFLGGKDPQDTELLDLNTGYFSLRQIKTATNNFDPANKIGEGGFGPVFKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLIYEYMENNSLARALFGREEQRIHLDWPTRLKICQGIARGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKDEFVYLLDWAYVLQEQGNLLELVDPYLGSSYSQDEAMRMLNLALLCTNPSPTLRPAMSSVVSMLEGNIPIQAPIIKRKDASQDARFKAFEMLSHDSQTSIASQTSMEQRGKSMDGPWIDSSISLPSGDDYSSSRKLL 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0543 1021 ProSiteProfiles Protein kinase domain profile. 677 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0543 1021 Pfam Malectin domain 425 605 IPR021720 -
Lele10g0543 1021 Gene3D Ribonuclease Inhibitor 99 272 IPR032675 -
Lele10g0543 1021 FunFam Putative LRR receptor-like serine/threonine-protein kinase 753 960 - -
Lele10g0543 1021 SMART serkin_6 677 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0543 1021 Pfam Protein tyrosine and serine/threonine kinase 681 946 IPR001245 GO:0004672|GO:0006468
Lele10g0543 1021 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 219 286 - -
Lele10g0543 1021 Pfam Leucine Rich Repeat 326 346 IPR001611 GO:0005515
Lele10g0543 1021 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 649 752 - -
Lele10g0543 1021 SMART LRR_typ_2 202 225 IPR003591 -
Lele10g0543 1021 SMART LRR_typ_2 131 154 IPR003591 -
Lele10g0543 1021 SMART LRR_typ_2 323 346 IPR003591 -
Lele10g0543 1021 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 54 218 - -
Lele10g0543 1021 Gene3D Phosphorylase Kinase; domain 1 648 752 - -
Lele10g0543 1021 Gene3D Ribonuclease Inhibitor 283 400 IPR032675 -
Lele10g0543 1021 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 423 610 - -
Lele10g0543 1021 SUPERFAMILY L domain-like 104 382 - -
Lele10g0543 1021 SUPERFAMILY Protein kinase-like (PK-like) 662 967 IPR011009 -
Lele10g0543 1021 Gene3D - 423 610 - -
Lele10g0543 1021 CDD STKc_IRAK 683 950 - -
Lele10g0543 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Lele10g0543 1021 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 34 985 - -
Lele10g0543 1021 ProSiteProfiles Leucine-rich repeat profile. 325 348 IPR001611 GO:0005515
Lele10g0543 1021 Gene3D Transferase(Phosphotransferase) domain 1 753 958 - -
Lele10g0543 1021 MobiDBLite consensus disorder prediction 981 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0543 Lele-ChrLele10 3974739 3986702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0543 30 1012 Receptor kinase-like Gene Family AT1G53440 62.860 0.0 1244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele10g0543 PK_Tyr_Ser-Thr 7e-50 CL0016