Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0541 ATGGAGTTTGCCATTTCAAGCTCCAAACTTTTCTCTCTATTCTTCTTCGGATTTCTTCTGCTATGTTTCTTCTTAGATTTTCCATCAAATGCTCAACTTATACCCCAACAAGAAGTGAAAGCTTTACAGGCAATATCTGATAAGCTCTCAAACGTGAAGTGGAAGGTGACAACATCATCTTGTATTAATGGAGAAGGATTTAATAACCTCTTAACTCCTTCATCCTCTGGAGTAACCAGGAATGTCACTTGCAATTGCAATTTCCAAAACGGCGCCGTTTGCCATGTGACTAATATTCTGTTGAAAAGCCAAAATATAGCAGGAGAAATACCCAGTGAATTTGGAAATCTCACCCATTTGACTGAACTTGATCTTTATTTCAACTATCTCAATGGCTCAATTCCAACGTCTTTTAGGCACATCCCTCTTGTCACTCTGTCCCTTGTGGGGAATCGCATTAGTGGTTCAATTCCTGAAGAATGGGGTGAAATTGCTAGTCTGATGGATTTGGTCCTTGAAGATAATCAGCTTGGAGGACCTCTTCCTCATAGTCTTGGAAATTTGGAAAACTTGCGGAGAATGAACTTGGCTTCCAGCCTTTCGCCTTCAATTTCAAAGTTTCTTCAAAAGGTTTGTCTGTTGGAGCTATTGTTGGAATTGTTGTTGGATCGTGCGTCTTCCTTGTACTTGTACTCATCATTGTCCTCAGAAAGAATGGCTTCCTTGGTGGGAAAGATCCAAAAGACAAAGGGTGTGTTGTCTGATGGTGTCGTCATTGCGATTAAGCAGCTATCTTCCAAGTCGAAGCAAGGAAATCGTGAATTTGTTAATGAAATAGGAATGATTTCTGCTTTGCAACATCCAAATCTTGTGAGGCTTTACGGTTGTTGCATCGAAGGAAATCAATTGTTGCTTGTATATGAATACTTGGAGAACAACAATCTTGCTCGAGCACTTTTTGGCAGTGATGAACAAAGGATACACTTGGACTGGCCCACAAGAGCCTATGTTCTCCAAGAGCAAGGGAAGCTTCTAGAATTGATGGATCCGCGTCTCGGTTCAAGCTACTCCAAAGATGAGGCCATGAGAATGCTAAATTTGGCTCTTTTGTGCACCAGTCTATCTCCCACTCTCAGGCCCTGCATGTCATCTGTAGTGAGCATGATTGAGGGAAAAACTCCAATCCAAGCACCAATTATAAACAACAACAAAGATCAAGATGCAAGGTTCAAAGCCCTTGAGATGCTGTCGGATGATAGCCAGACATGTTGTCTCTCTGTTTCTGCCCTGTTCATCAGTTAG 1302 0.4163 MEFAISSSKLFSLFFFGFLLLCFFLDFPSNAQLIPQQEVKALQAISDKLSNVKWKVTTSSCINGEGFNNLLTPSSSGVTRNVTCNCNFQNGAVCHVTNILLKSQNIAGEIPSEFGNLTHLTELDLYFNYLNGSIPTSFRHIPLVTLSLVGNRISGSIPEEWGEIASLMDLVLEDNQLGGPLPHSLGNLENLRRMNLASSLSPSISKFLQKVCLLELLLELLLDRASSLYLYSSLSSERMASLVGKIQKTKGVLSDGVVIAIKQLSSKSKQGNREFVNEIGMISALQHPNLVRLYGCCIEGNQLLLVYEYLENNNLARALFGSDEQRIHLDWPTRAYVLQEQGKLLELMDPRLGSSYSKDEAMRMLNLALLCTSLSPTLRPCMSSVVSMIEGKTPIQAPIINNNKDQDARFKALEMLSDDSQTCCLSVSALFIS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0541 433 Pfam Protein tyrosine and serine/threonine kinase 255 330 IPR001245 GO:0004672|GO:0006468
Lele10g0541 433 ProSiteProfiles Protein kinase domain profile. 228 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0541 433 Gene3D Ribonuclease Inhibitor 37 212 IPR032675 -
Lele10g0541 433 SUPERFAMILY Protein kinase-like (PK-like) 251 338 IPR011009 -
Lele10g0541 433 SUPERFAMILY L domain-like 89 217 - -
Lele10g0541 433 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 201 - -
Lele10g0541 433 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 336 416 - -
Lele10g0541 433 FunFam Os04g0616200 protein 249 310 - -
Lele10g0541 433 Gene3D Transferase(Phosphotransferase) domain 1 308 407 - -
Lele10g0541 433 Gene3D Phosphorylase Kinase; domain 1 243 307 - -
Lele10g0541 433 SMART tyrkin_6 240 389 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0541 Lele-ChrLele10 3964690 3971694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0541 329 422 Receptor kinase-like Gene Family AT1G53440 63.265 8.26e-30 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele10g0541 PK_Tyr_Ser-Thr 3.9e-12 CL0016