Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0538 ATGAGGTTGGCTCGTTTAATCTTCATCCTTTCCCTCCTCACAGTTTGGTCCACATCTTTTGCTTCTGCAACAAATTTACCAGACGATGAAGTGAAAGCACTGAAAGATATGGCGAAGGCGTTGGGGAAGAAGGATTGGGACTTCAAGGTAGATCCCTGCAGTGGAGAAAATGGATGGGTTACGCCAAATCCTGTTCATGGCGATGAAAACAATGTCACCTGCGTTTGCTCTTCTTCTGTCAGCGATAATAATTCCACCGTCTGCCACGTCACCAACATAGTGCTGAAAGGACAAAATCTTCAAGGCACGCTCCCTCGTGAACTGGTCAGGTTGCCCTATCTTCAAGAAATTGATCTCTCTCGCAATTACCTGAACGGCACAATCCATAAAGAATGGGGCTCCTTGAATCATCTTGTCAACATTTCCCTCATTGGAAATCGATTGACGGGCCCAATCCCAGCAGAGCTTGGAAATCTCACCAGTCTCAGAAGCATGGTTTTGGAGTTCAATCAATTATCTGGACATTTACCTCCGGAGCTTGGGAATCTTTCTCAGATTCAAAGACTGTTTCTTACTTCCAACAATTTTTTTGGGGAATTACCTGCAACATTTGCAAGGCTCACTAGATTGATAGACTTTCGAATTGGTGGCAATCAATTTTCTGGAAAGATACCCAGTTTTATTGGGAGCTGGACGAGTCTAGTGAAACTAGTGATCCAAGGGAGTGGTTTGAGAGGGCCAATTCCCTCAGAAATTTCGTTTCTGCATAACATGACTGACTTGAGAATTAGTGACTTGAATGGACCTGATTCCTCTTTTCCACGACTTGCTACGATGACAGGATTGAAGAGACTGGTATTAAGGAGTTGCAATATCACTGGAACACTACCTGAATATCTTGGAACAATGACCAGTATAAAATCCTTAGATCTCAGCTTTAATGAATTAACTGGACAAATTCCAAGCACCTATGCTGGCTTAAGAAAAGCAGAATACATATATTTAACTGGAAACGTTCTCTCTGGACCAGTGCCTGAGTGGGTAGAACGTTCCGGCTTTGTAGATCTTTCATACAACAACTTCAGCATTGGAAACCCAGGGCAGCCAACATGTAAAACGGGCAATGTGAACCTGTTTTCAAGCGCTTTGACAGGAAATAACTCGGGAACAGTTCCATGTTTGACAGGCTTTCGCTGTCCTAAAACCTGGTACTCTCTACATATTAACTGTGGTGGCCAGAAATTAACAGTAAACGGAAGTACAATTTTTGAAGAAGATTCAGATGGATCCGGATCAGCAAGATTTTACCGGAGTGACACAAATTGGATAACGAGCAGCACTGGTTACTTCTTTGATAAAGAACGTGTAGATTACTATACCGTGCGAAGTGCATCTTCACTCTCTATAACCAATGCTGAATTATACATGGCCGCACGTGTTTCTCCACTCTCTCTGAGTTATTTTGCATTTTGCATGGGAAACGGAAACTACACAGTAAAGCTCCATTTTGCAGAGATAATGTTCACAGATGATAAAACATATAGCAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGGCAGTCATCAAAGAATTCACCGGTATTGTGACTAGGAATTCATTGGAGATCCGTCTCTATTGGGCTGGGAAAGGGACAACTGCTATTCCATATAAATCACTATATGGTCCACTTATATCAGCTATATCTGTGGAACCTGACTTTAAACCTCCATTGGAAAATGGAAGTAGCATATCTGGAGGGACTGTTGCTGGCATTGTGGTTTCTGGAGCAATTATTGTAATCCTGGTCTTTCGTACACTTTGGTGGAGAGGCAATCTAGGAACCAAAAATTCATTGGCAAGAGAGCTGAAGAATTTAAATCTGCAAACTGGAATATTTACTTTAAGGCAAATTAAAGCAGCGACAAACAACTTTGATGTTGCTAATAAGATTGGAGAAGGGGGGTTTGGTCCTGTTTACAAGGGCTTTCTGTCAGATGGGACCATAATAGCAGTTAAGCAACTTTCTTCTAAATCAAAGCAAGGAAATCGGGAGTTTATAAATGAGATAGGCATGATTTCTGCTATGCAACATCCTTGTCTTGTTAAACTTCATGGCTGTTGTGTTGAGAGAGATCAATTGTTGCTGGTATATGAATACATGGAGAACAATAGTCTCGCCCGTGCTTTATTTGGCCAAGAAGGTCGATTACATTTAGACTGGCCGACAAGATACCGGATATGTATCGGTATTGCTAGAGGTTTGGCTTTCCTCCATGAAGAGTCAAGATTGAAGATCGTTCATAGGGACATTAAAGCCACCAATGTGTTGCTTGATAAAGATCTCAATCCGAAGATATCTGATTTTGGTTTGGCCAAACTTTATGAAGAAGACAACACCCATGTCAGCACTAGAATAGCTGGGACATATGGATATATGCCTCCTGAATATGCAATGCATGGTCATCTGAGCGACAAAGTAGATGTCTATAGTTTTGGCGTTGTTGCATTGGAAGTTGTAAGCGGGAGGAGCAACAACATGGACCATAGCCTCCATCTTCTTGATCGGGCACATTTCTTAAAAGAAAACGACAATCTAATGGAGATAGTTGATCCAAGGTTGAAATCGAATTTTATAAAAGCAGAGGCTATGGTGATGATCAATGTAGCTTTCTTATGCACAAATGTGAGTGCATCACTTAGGCCCAGCATGTCTTATGTGGTAAGCATGCTTGAAGACAGAACTGTTAGGGAGGTAGTTTCAGACGCAAGTGAGGCATCGGAGGGGATGAAGAAAATGCAGAAGTATTACCAAAATATTGGGAAAAATAGCATATCAACAATGGAGGAGGTATCAAGTATTGATTCACCTACATCAGTTTCTGATCTCTATCCTGTTAACTTGGATTCCTCTTATTGGATGCAAAGAAATTAG 2994 0.4158 MRLARLIFILSLLTVWSTSFASATNLPDDEVKALKDMAKALGKKDWDFKVDPCSGENGWVTPNPVHGDENNVTCVCSSSVSDNNSTVCHVTNIVLKGQNLQGTLPRELVRLPYLQEIDLSRNYLNGTIHKEWGSLNHLVNISLIGNRLTGPIPAELGNLTSLRSMVLEFNQLSGHLPPELGNLSQIQRLFLTSNNFFGELPATFARLTRLIDFRIGGNQFSGKIPSFIGSWTSLVKLVIQGSGLRGPIPSEISFLHNMTDLRISDLNGPDSSFPRLATMTGLKRLVLRSCNITGTLPEYLGTMTSIKSLDLSFNELTGQIPSTYAGLRKAEYIYLTGNVLSGPVPEWVERSGFVDLSYNNFSIGNPGQPTCKTGNVNLFSSALTGNNSGTVPCLTGFRCPKTWYSLHINCGGQKLTVNGSTIFEEDSDGSGSARFYRSDTNWITSSTGYFFDKERVDYYTVRSASSLSITNAELYMAARVSPLSLSYFAFCMGNGNYTVKLHFAEIMFTDDKTYSSLGRRVFDVYIQGKLVLKDFNIAEEAGGVGKAVIKEFTGIVTRNSLEIRLYWAGKGTTAIPYKSLYGPLISAISVEPDFKPPLENGSSISGGTVAGIVVSGAIIVILVFRTLWWRGNLGTKNSLARELKNLNLQTGIFTLRQIKAATNNFDVANKIGEGGFGPVYKGFLSDGTIIAVKQLSSKSKQGNREFINEIGMISAMQHPCLVKLHGCCVERDQLLLVYEYMENNSLARALFGQEGRLHLDWPTRYRICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNTHVSTRIAGTYGYMPPEYAMHGHLSDKVDVYSFGVVALEVVSGRSNNMDHSLHLLDRAHFLKENDNLMEIVDPRLKSNFIKAEAMVMINVAFLCTNVSASLRPSMSYVVSMLEDRTVREVVSDASEASEGMKKMQKYYQNIGKNSISTMEEVSSIDSPTSVSDLYPVNLDSSYWMQRN 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0538 997 Pfam Leucine rich repeat 281 340 IPR001611 GO:0005515
Lele10g0538 997 Gene3D Transferase(Phosphotransferase) domain 1 741 957 - -
Lele10g0538 997 Pfam Protein kinase domain 666 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0538 997 Gene3D - 403 592 - -
Lele10g0538 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 952 - -
Lele10g0538 997 FunFam Putative LRR receptor-like serine/threonine-protein kinase 741 942 - -
Lele10g0538 997 SUPERFAMILY L domain-like 69 346 - -
Lele10g0538 997 Gene3D Ribonuclease Inhibitor 193 271 IPR032675 -
Lele10g0538 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 593 - -
Lele10g0538 997 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 27 267 - -
Lele10g0538 997 Gene3D Ribonuclease Inhibitor 272 387 IPR032675 -
Lele10g0538 997 Gene3D Phosphorylase Kinase; domain 1 632 740 - -
Lele10g0538 997 SUPERFAMILY Protein kinase-like (PK-like) 648 934 IPR011009 -
Lele10g0538 997 SMART serkin_6 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0538 997 CDD STKc_IRAK 671 932 - -
Lele10g0538 997 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Lele10g0538 997 Pfam Malectin domain 405 588 IPR021720 -
Lele10g0538 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Lele10g0538 997 ProSiteProfiles Protein kinase domain profile. 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0538 997 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 634 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0538 Lele-ChrLele10 3929929 3938406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0538 20 979 Receptor kinase-like Gene Family AT1G53420 55.975 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele10g0538 Pkinase 1.5e-45 CL0016