Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0532 ATGCCTGGGAATAAGTATAACGGTAATCCTAATCATTTTCCAGGTCGTGTTGGACGACTTGTCAGAGAAAGAGAGCTAAGAAAAATCAGCAGGGCTTCTCATTTCAATGGTTCAGCTGATAATAATAATAATAATAGGGTTACTGAACCGTTTGAGCATAACCAGCGTTTAAGAGAAGATAATAATTCAGGGGCCTCTCATGCACAATACCTGGAGCGAACTCCAAGGGCGCTTAGCGAGGGATGTGAAGGACAAGATGTGAGGCCTTATAGACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCAGTTAGGAGAGGCGAAGATTCATGGTCTCTGGAGATTAGTGCTGGAGGTCTAGTTACCGCTCTTTTAGGTGTGAAGGAATTTGAGGCAAGGTGGATAGGGTGGGCTGGTGTCAATGTGCCAGACGAGATTGGACAGAAGGCACTTACTAAAGCTTTGGCTGAAAAGAGGTGCATTCCAGTATTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGTTACTGCAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGGCTACCCCAAGAAGATCGCCTTGCTACAACACGGAGCTTCCAGTCTCAGTTTGCAGCATACAAGAAAGCAAACCAAATGTTTGCTGACGTCGTTAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTTCTTCCAAAATGTTTAAAGGAATATAACAGTAAAATGAAAGTTGGCTGGTTTCTTCACACCCCATTTCCATCTTCTGAAATTCATAGGACATTACCATCACGTTCAGAGCTCCTCCATTCTGTTCTCGCTGCTGATTTAGTAGGATTTCACACCTATGATTATGCACGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACTCCTGAAGGGGTTGAGGATCAGGGGAGATTGACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCTGATCGATTCATACGTGCACTTGAGCTTCCTCAAGTGAAGGAACATATCAAAGAATTGGAACAAACATTTGAGGGTAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGGATTCCTCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAGAATGCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTCCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGAAGATTTGGAACATTGACTGCTGTTCCTATACATCACCTGGACCGTTCACTTGATTTTCATGCACTATGTGCTTTATATGCTGTTACTGATGTAGCTCTGGTCACATCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATTTGTAGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGCGCTGCACAGTCTCTAGGTGCGGGAGCAATTCTGGTTAACCCCTGGAACGTCACAGAAGTTGCAGCTGCAATTGCGCAGGCTCTGAATATGTCATCTGGGGATAGAGAGAAACGTCATAAGCACAATTATGTACATGTAACTACCCACACTGCTCAAGAATGGGCTGAGACTTTTGTAAGTGAACTAAATGATACTGTGGTCGAGGCACAACTAAGGACAAGACAATTTCCACCCCCACTTCCAACAAAGACTACAATTGAACGTTATCTGCAGTCAACTAATCGATTGCTTATATTGGGATTCAATGCAACTTTAACTGAACCAGTGGAAAAGAAAGGCGATCAGATTAAGGAAATGGAACTCAAGGTGCATCCAGAATTAAAACAACCATTGACAGCACTTTGCAATGACCCGAAGACAACAATTGTTGTGCTTAGTGGAAGTGGTCGAAGTGTCTTATATAATAGTTTTAAGGAATACAACATGTGGCTAGCCGCAGAGAACGGGATGTTTCTACGCCCTGCAAAGGGAGAATGGATGACAACAATGCCAGAGCATTTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAATACTTCACAGAAAGAACCCCCCGGTCTCATTTTGATGTTGAAGAAAGGGAGACCTCGCTTGTATGGAACTACAAATATGCCGATGTTGAGTTTGGAAGACTTCAAGCAAGAGATATGTTGCAGCATCTCTGGACTGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCGGTCGAAGTGCGAGCTGTTGGTGTTACGAAGGGGGCAGCCATTGACCGCATCTTGGGTGAGATAGTTCACAGTAAATCCATGACAGCACCAATCGATTACGTTCTTTGTATAGGACATTTCTTATCAAAGGATGAAGATGTTTATTCCTTTTTCGAACCGGAGCTTCCTTCTGGAGGCGTGGGTGTTGCGCGAGCCAAGGCATCGGAAGCAGCTAAGGTTCCGGCTGAGAGACGATACTCTCTGAAGATCCCAACCAGTACTAAAACTGGAACAAAGTCATCATCTCAAAATAAGGCACAACGGCCAGTGTCAAATTCTGAGAAGAAAACCACAAACCATAACTGTAATGCACCAAGGAAGCCGGCACCAGAGAAGATATCATGGAATGTGCTTGACCTCAACAAGGAGAACTACTTCTCTTGTGCCGTTGGCCGAACCCGAACAAATGCTCGCTATACGCTTGGATCTTCAGATGTTGTTGTTTCATTCCTCAAGGAACTGGCTCAAGCTTCTTCTCCAAATCATTTATCAACCAATTAA 2808 0.4334 MPGNKYNGNPNHFPGRVGRLVRERELRKISRASHFNGSADNNNNNRVTEPFEHNQRLREDNNSGASHAQYLERTPRALSEGCEGQDVRPYRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVTALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALELPQVKEHIKELEQTFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAAAIAQALNMSSGDREKRHKHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQFPPPLPTKTTIERYLQSTNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELKQPLTALCNDPKTTIVVLSGSGRSVLYNSFKEYNMWLAAENGMFLRPAKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDVEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTAPIDYVLCIGHFLSKDEDVYSFFEPELPSGGVGVARAKASEAAKVPAERRYSLKIPTSTKTGTKSSSQNKAQRPVSNSEKKTTNHNCNAPRKPAPEKISWNVLDLNKENYFSCAVGRTRTNARYTLGSSDVVVSFLKELAQASSPNHLSTN 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0532 935 CDD HAD_TPP 591 810 - -
Lele10g0532 935 SUPERFAMILY HAD-like 590 829 IPR036412 -
Lele10g0532 935 MobiDBLite consensus disorder prediction 834 878 - -
Lele10g0532 935 Gene3D Glycogen Phosphorylase B; 86 339 - -
Lele10g0532 935 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 92 561 - -
Lele10g0532 935 MobiDBLite consensus disorder prediction 838 873 - -
Lele10g0532 935 Gene3D - 680 762 - -
Lele10g0532 935 FunFam Alpha,alpha-trehalose-phosphate synthase 614 685 - -
Lele10g0532 935 Pfam Glycosyltransferase family 20 93 558 IPR001830 GO:0003824|GO:0005992
Lele10g0532 935 Pfam Trehalose-phosphatase 613 836 IPR003337 GO:0003824|GO:0005992
Lele10g0532 935 Gene3D Glycogen Phosphorylase B; 340 542 - -
Lele10g0532 935 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 93 558 IPR012766 GO:0003825|GO:0005992
Lele10g0532 935 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 340 542 - -
Lele10g0532 935 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 85 339 - -
Lele10g0532 935 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 85 925 IPR001830 GO:0003824|GO:0005992
Lele10g0532 935 CDD GT20_TPS 93 558 IPR001830 GO:0003824|GO:0005992
Lele10g0532 935 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 680 762 - -
Lele10g0532 935 Gene3D - 614 805 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0532 Lele-ChrLele10 3851832 3859919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0532 1 928 Trehalose Biosynthesis Gene Families AT1G78580 78.302 0.0 1497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0580 09 4396599 4404496 Lele10g0532 10 3851832 3859919 ECH
Lele10g0532 10 3851832 3859919 Lele10g0532 10 3851832 3859919 ECH
Lele10g0532 10 3851832 3859919 Lele11g0591 11 5797295 5806222 hybridization
Lele10g0532 10 3851832 3859919 Lele12g0743 12 15563799 15572033 hybridization