Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0512 ATGGGCGAAGACGAAAAACCAAACAAAGCCGGACATTTCTCCGGCCAACAATATCCCAGCGCCCCGCCTCAATACGGCACATACTCTCCTCCTCCTCCACCTCCGCCTCCACCGGAACCACAGCCGCCTACTGGCTTCCCGGAACCTGTTCCTCCGCCGGGCTCCATCCAGCCCCCTCCCGTTCCACCTGAGTATTACGTTCAGGGCTACCAAGCTGTTACTGGGTATCCCGTTGCTGAAGGAAGACCTGCAAGACCTCGCCGTCTTCGTTGTTGTGGTCTTGGTTGTGGCTGGTGCCTGTTTATATTAGGATTCTTCCTTGCGGCGATACCATGGTATGTGGGGGCAGTGATTCTGATGTGTTCCAGAAGATACGAAGTAGACTCCAGAGAGAAACATGGATTGCTTGCCTGTTCTGTTGCTGCTGTTATCGTTACTATTGCTATTATTATTGGCGTGACCAAGGGAGCAAATCTCTGGTAA 483 0.53 MGEDEKPNKAGHFSGQQYPSAPPQYGTYSPPPPPPPPPEPQPPTGFPEPVPPPGSIQPPPVPPEYYVQGYQAVTGYPVAEGRPARPRRLRCCGLGCGWCLFILGFFLAAIPWYVGAVILMCSRRYEVDSREKHGLLACSVAAVIVTIAIIIGVTKGANLW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0512 160 MobiDBLite consensus disorder prediction 24 63 - -
Lele10g0512 160 MobiDBLite consensus disorder prediction 1 63 - -
Lele10g0512 160 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 160 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0512 Lele-ChrLele10 3712337 3713675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0512 66 160 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.333 3.36e-18 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0512 10 3712337 3713675 Lele10g0512 10 3712337 3713675 ECH
Lele10g0512 10 3712337 3713675 Lele11g0564 11 5596785 5598150 hybridization
Lele10g0512 10 3712337 3713675 Lele12g0768 12 15723668 15729123 hybridization