Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0511 ATGGATATAACCGAAATTACAATATTGCATCATTCGGCCATTGTGCTTCTGGGGCTTTGGTTGCTATCTGCCTTCAACTGGTGCCACCCCGTTGCTTATTTTGTAGCATTTATCTATCTCTACCTGGTTCATGAACGTTATGTCACGAGACTGCGGAGGAAGTTACAATTTGAGGAGAGGAAGCAAGCTAATCAAAGAAGGGTTCTTTCTGATTCTGAATCAGTGAGGTGGTTGAACCATGCGATTGAAAACATATGGCTCATATGTATGGAACAAATTACCTCTCAGAAGATTTTGCTCCCAATCATACCTTGGTTCTTGGAGAAGTACAAACCCTGGACCGCAAAAAAAGCCGTGGTTCAGCATCTGTACCTGGGGAGAAACCCCCCTTTATTTACTGAAATGAGGGTGCTTCGTCAAAATGGTGATGACCACTTGGTTCTGGAATTAGGAATGAATTTTCTGACGGCTGATGATATGAGTGCAATAATAGCTGTAAAACTAAGGAAAAGATTAGGCTTTGGGATGAGGGCAAAGCTGCACATAACGGGTATGCATGTTGAAGGGAAGGTTTTGGTTGGGGTAAAATTTCGTCAAACATGGCCTTTCCTTAGTCGTTTGCGTGTATGCTTTGTTGAACCTCCATACTTCCAAATGACTGTTAAGCCCATATTTACTCATGGGCTTGATGTGACAGAAGTTCCTGGGATTGCTGGATGGCTAGATAAGCTTTTGTCTATTGCATTTGAACAGACTCTTGTTGAGCCTAATATGCTGGTTGTTGATGTCGAGAAATTTGCTTCACCTCAGCCAGAGCCTTGGTTCTCCATCAACGAGAAGGAGCCTGTTGCCTATGCCCATGTAGAAGTTGTTGAAGGATCTGACATGAAGCCATCAGACCTAAATGGGTTAGCAGATCCATATGTAAAAGGTCATTTAGGTGGCTACAGATTCAGGACAAATATACAAAGGAAAACACTTGCTCCAAAATGGCTAGAAGAATTTAAAATCCCTATTATAACATGGGAGTGTGCTAATGTGTTGGCTATTGAAGTTTGTGACAAGGACCACTTTTATGATGATAACCTCGGAAACTGTTCTGTCAACCTCTGTGATTTGAGGGATGGCCAGAGACATGATATGTGGTTACCTCTTCAGAATATTAAAACTGGGAGGTTGCACCTGGCTATAACTATTCTTGAAGACAATTCAAAGGAGGTTGATAAAACATGTAACGAGGAAGCAATGGATGCTGAACAAGAAAGGAATTCCTTTGCAAATGAGACTTACAATAAAAATTCATTTTCATCTGTTTCATCAGAAAAATCCCAAAAAGTTGCGGATAACTATGAGCCTATTGATGTTGAAGGGCAAAACGAGACTGGAATTTGGGTTCATCAACCAGGTAGTGAAGTATCGCAAACATGGGAACCTAGAAAAGGGAGAAGCCGACGCCTTGATACTGAAATTCACAGGGAGCCCAATGATTTATGTGGAAGTTTTAATTCAGCAGCATCTGGATCCTTAAACAATGACTGCAGCAGTCCTGATGATAACCCAGAGCATAAGCACAGAATAAAATCAGTTTGGAAGGGACTGCACAATATTTGGCCAGTGTTTCGGAGGGGCCCAAAGAATGAGCCTCCAACACCGACATCAGCTCGTGGTGTTGGAGAGGCAGAGGCTGTTCCATCTCCGCATGCAAACATTAAGCCTGAGAATGCCAAGGAGATTGGTGTGCGCTTTGTTATGGAGGATAACATTTCTGGGCTGGCCTCGGGTAAGGTTCAGATGGAAGGAACATCCCCTGAAAGCAATAGTTCTGAGAGCCCAGGCAACGGAAATGCCAAAGATAAGGCAAAAAATATGCTGAAGCATGCTGCAGGGAAATCAGCTCGTGGCCTAAAGCATGTGCTTTCCTATAAATCAAGAAAATCTGAAGTTGACTCACTTCGAGAAACAACTAGAGTCTCAGAAGAATCTGATTCTTCTGATGATGATGATTCCCTTTCAGTTCCATCACCCAGAGATGGAAGAATTCCCGTTGCTTCCAAGGTCATTGTTTCTTTCAACAATGATCCCTCCAATTCCAGTGAGAATGTTGTGGTTCAGACACATTTGCCTGACGTTACTTTGGGCGATGAAGTTCCGACAAAGAAGCTGGGTGTTGAAGAGGAGCCTGCACTGCATGGCAGCCCTGACAAATCTTCAAAAGATTATGTTGATACAAAGCATGGCTGCCCTGACAAATCTTCAGAAGGTTATGTTGAAACAAAGCATGACAGAGTGAGTGGTGGGATGGAACAGATATGA 2313 0.4289 MDITEITILHHSAIVLLGLWLLSAFNWCHPVAYFVAFIYLYLVHERYVTRLRRKLQFEERKQANQRRVLSDSESVRWLNHAIENIWLICMEQITSQKILLPIIPWFLEKYKPWTAKKAVVQHLYLGRNPPLFTEMRVLRQNGDDHLVLELGMNFLTADDMSAIIAVKLRKRLGFGMRAKLHITGMHVEGKVLVGVKFRQTWPFLSRLRVCFVEPPYFQMTVKPIFTHGLDVTEVPGIAGWLDKLLSIAFEQTLVEPNMLVVDVEKFASPQPEPWFSINEKEPVAYAHVEVVEGSDMKPSDLNGLADPYVKGHLGGYRFRTNIQRKTLAPKWLEEFKIPIITWECANVLAIEVCDKDHFYDDNLGNCSVNLCDLRDGQRHDMWLPLQNIKTGRLHLAITILEDNSKEVDKTCNEEAMDAEQERNSFANETYNKNSFSSVSSEKSQKVADNYEPIDVEGQNETGIWVHQPGSEVSQTWEPRKGRSRRLDTEIHREPNDLCGSFNSAASGSLNNDCSSPDDNPEHKHRIKSVWKGLHNIWPVFRRGPKNEPPTPTSARGVGEAEAVPSPHANIKPENAKEIGVRFVMEDNISGLASGKVQMEGTSPESNSSESPGNGNAKDKAKNMLKHAAGKSARGLKHVLSYKSRKSEVDSLRETTRVSEESDSSDDDDSLSVPSPRDGRIPVASKVIVSFNNDPSNSSENVVVQTHLPDVTLGDEVPTKKLGVEEEPALHGSPDKSSKDYVDTKHGCPDKSSEGYVETKHDRVSGGMEQI 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0511 770 MobiDBLite consensus disorder prediction 640 659 - -
Lele10g0511 770 MobiDBLite consensus disorder prediction 541 571 - -
Lele10g0511 770 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Lele10g0511 770 MobiDBLite consensus disorder prediction 718 770 - -
Lele10g0511 770 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Lele10g0511 770 MobiDBLite consensus disorder prediction 595 681 - -
Lele10g0511 770 SMART C2_3c 285 382 IPR000008 -
Lele10g0511 770 Gene3D C2 domain 274 401 IPR035892 -
Lele10g0511 770 MobiDBLite consensus disorder prediction 708 770 - -
Lele10g0511 770 MobiDBLite consensus disorder prediction 595 615 - -
Lele10g0511 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 283 399 IPR035892 -
Lele10g0511 770 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 704 - -
Lele10g0511 770 Pfam C2 domain 287 385 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0511 Lele-ChrLele10 3701692 3707502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0511 281 418 Lipid Metabolism Gene Families AT3G61300 26.573 1.23e-07 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0511 10 3701692 3707502 Lele10g0511 10 3701692 3707502 ECH
Lele10g0511 10 3701692 3707502 Lele11g0562 11 5584690 5590233 hybridization
Lele10g0511 10 3701692 3707502 Lele12g0769 12 15737048 15751529 hybridization