Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0495 ATGGCGGATGAAGTGATTCTCCTGGATTTCTGGCCAAGCCCATTTGGGATGAGGGTTCGAATCGCTCTTGCAGAGAAGGGAATAGAGTACGAAGGAAGAGAAGAAGACTTGAGCAACAAGAGCCCTCTGCTTCTAAAGATGAACCCTATTCATAAACAAATCCCAGTTCTGATTCACAACGGAAAACCCATCTCTGAATCTCTCATCATTCTTCAATACATCGATGAGGTTTGGAATCAAAACAAGAATAAATTGCTTCCCTCTGATCCCTACCAGCGAGCCAATGCCAGATTCTGGGCTGACTACATCGACAAGAAGATATATTCGACTGGTAGATTGGTGTGGGCAACTACAGGGGAGGTACAAGAAAGAGCCAAGAGTGAACTGAGAGAATGCTTCAAGCTGTTGGAAGCACAGTTAGGGAACAAGAGTTTCTTTGGTGGTGACATGTTTGGTTTGGTGGACGTGGCTCTGATTCCATTTTACAGCTGGTTCTTCACGCTTGAAAGTTCCGGGAACGTCAGCATCGCCGACGAGTTTCCCGGGCTGGTGGCTTGGGCCAAGAGGTGCATGCAGAGGGAGAGTGTGGCCAAATCTGTGCCTGACCAGTACAAAGTTTATGACTTCCTCTTAGACCTCAAGAAGAAGCTTCAACCTCAGCTTCAGCAGCAACACTGA 678 0.472 MADEVILLDFWPSPFGMRVRIALAEKGIEYEGREEDLSNKSPLLLKMNPIHKQIPVLIHNGKPISESLIILQYIDEVWNQNKNKLLPSDPYQRANARFWADYIDKKIYSTGRLVWATTGEVQERAKSELRECFKLLEAQLGNKSFFGGDMFGLVDVALIPFYSWFFTLESSGNVSIADEFPGLVAWAKRCMQRESVAKSVPDQYKVYDFLLDLKKKLQPQLQQQH 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0495 225 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Lele10g0495 225 FunFam Tau class glutathione S-transferase 1 86 - -
Lele10g0495 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Lele10g0495 225 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Lele10g0495 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Lele10g0495 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lele10g0495 225 CDD GST_N_Tau 5 78 - -
Lele10g0495 225 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Lele10g0495 225 Gene3D - 89 219 - -
Lele10g0495 225 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Lele10g0495 225 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Lele10g0495 225 FunFam Glutathione S-transferase U20 89 220 - -
Lele10g0495 225 Gene3D Glutaredoxin 1 88 - -
Lele10g0495 225 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Lele10g0495 225 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0495 Lele-ChrLele10 3522409 3523178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0495 1 220 Glutathione S-transferase Gene Family AT1G78380 65.000 7.98e-104 297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0495 10 3522409 3523178 Lele11g0537 11 5309064 5311305 hybridization