Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0492 ATGGCGGAAGAAGAGGTAGTGTTATTGGACGAGTGGCTGAGCATGTTTGGAACGAGAGCCAGAATAGCTTTGGCAGAGAAGGGAATCAAATACGAGTACAAAGAAGAAGATCTGAGCAACAAGAGCCCTCTGCTTCTGCAAATGAACCCAACTCACAAGAAGATCCCTGTTCTTATTCACAGTGGCAAACCTATCTGTGAATCACTCATAATAGTGGAATACATCGATCAAGTTTGGAACCACACTGCTCCTTTACTTCCCTCTGATCCTTACCTCAGAGCTCAAGCCAGATTCTGGGCTGATTTTGTCAACAAGAAGGTGGGAGATGTTGGGGGAAGGATATGGGGAGGGAAGAAAGAAGAAGGAGAAGAGGCAAAGAAAGAGATGATAGACAGCTTGAAGCAATTGGAAGAGACACTTGGAGACAAAACTTTCTTTGGAGGTGAAAGCTTTGGCTTTGTGGACATTGCTCTGATTCCATTCTATGTCTGGTTTTACACTTACGAGGAATTATGCAACTTCGAGGTGCAAACACATTGTCCAAAGATCATTGCCTGGGCTCACACATGCCTCCAGAGGCAGAGTGTTTCCAAATCTCTTGCTGCTGAGAAGGAGATCTTCGATTTCGTTGTTGACTACAGAAAGAAAAATCAGTTGGACTGA 663 0.4434 MAEEEVVLLDEWLSMFGTRARIALAEKGIKYEYKEEDLSNKSPLLLQMNPTHKKIPVLIHSGKPICESLIIVEYIDQVWNHTAPLLPSDPYLRAQARFWADFVNKKVGDVGGRIWGGKKEEGEEAKKEMIDSLKQLEETLGDKTFFGGESFGFVDIALIPFYVWFYTYEELCNFEVQTHCPKIIAWAHTCLQRQSVSKSLAAEKEIFDFVVDYRKKNQLD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0492 220 Pfam Glutathione S-transferase, N-terminal domain 8 77 IPR004045 -
Lele10g0492 220 Coils Coil 119 139 - -
Lele10g0492 220 Gene3D Glutaredoxin 1 88 - -
Lele10g0492 220 FunFam Glutathione S-transferase U20 89 220 - -
Lele10g0492 220 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Lele10g0492 220 Pfam Glutathione S-transferase, C-terminal domain 106 193 IPR004046 -
Lele10g0492 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Lele10g0492 220 SUPERFAMILY GST C-terminal domain-like 78 216 IPR036282 -
Lele10g0492 220 FunFam Tau class glutathione S-transferase 1 88 - -
Lele10g0492 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 219 IPR010987 -
Lele10g0492 220 CDD GST_N_Tau 6 79 - -
Lele10g0492 220 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Lele10g0492 220 Gene3D - 89 220 - -
Lele10g0492 220 SFLD Glutathione Transferase (cytosolic) 1 217 IPR040079 -
Lele10g0492 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 201 IPR045073 -
Lele10g0492 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0492 Lele-ChrLele10 3514602 3515338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0492 5 216 Glutathione S-transferase Gene Family AT1G78380 61.792 4.96e-99 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0492 10 3514602 3515338 Lele11g0532 11 5270995 5272400 hybridization