Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0490 ATGCAGGTGTATCCGACATGGAGGAAAATGTGGCTTTCAAAAGGGGAAGAGCATGAGACAGCAAAGAAGGAGCTGCTAGACATATTTAAGCTTCTGGAAGGGACACTTGACTCATTTGGGTTTCTTGATGTTGGTCTAATCCCATTTTCTTGCGGGTTTTACACATTTGAGACTTATGGGCACTTCAAGATGGAAGCAGAGTGCCCTAAACTCATGGCTTGGGTCAAGAGGTGTGTTCAGAGCAAAGAGAGTGTCTCCAAGACTCTTCCTGATGAGAAGAAGGAGTATGAATATCTATTGGCCTTAGAGAAGGTCATAACTGGAGCTTGA 330 0.4424 MQVYPTWRKMWLSKGEEHETAKKELLDIFKLLEGTLDSFGFLDVGLIPFSCGFYTFETYGHFKMEAECPKLMAWVKRCVQSKESVSKTLPDEKKEYEYLLALEKVITGA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0490 109 SUPERFAMILY GST C-terminal domain-like 3 104 IPR036282 -
Lele10g0490 109 CDD GST_C_Tau 2 102 IPR045074 GO:0004364|GO:0006749
Lele10g0490 109 Gene3D - 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0490 Lele-ChrLele10 3509565 3509894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0490 2 104 Glutathione S-transferase Gene Family AT1G17180 45.946 2.29e-27 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0490 10 3509565 3509894 Lele11g0530 11 5258835 5259612 hybridization
Lele10g0490 10 3509565 3509894 Lele12g0788 12 15924775 15925516 hybridization