Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0488 ATGGAAGACTATACCTTTTTCCCTCCTGATACAGATCTCGACCTCAGCTTCACCAGCACCACCTCCTCCGCCACTGATAGGACCTTTGCTTCTTCCAGTGCTCGGACCAGCTTGGCTCGCAGCAGTTTGACTCTCAGCTTTAACGAACGTCTATCCACTGCCTCTGCTGCCACCGCCGGAACTTCCTCTTCCACGCTATTCCTCCGACCGCATCGGGCCTCCGATCCTCATTGGTCAGCCATCAAAGCTGCCACTACTCTCTCATCTGACGGCGCCCTCCACCTCCACCACCTCAAGCTCCTCCGCCACCTCGGCACTGGGAATCTCGGGCGAGTATTCCTCTGTCGTCTTCGTGATTATGATCACGCAAACTTTGCTCTCAAGGTTGTCGATAAGGACTTGCTAAGCAGCAAGAAGCTCTCTCATGTGCAAATGGAGGGTGAGATCCTGTCCATGCTGGACCATCCTTTTCTTCCTACGCTCTACGCGCGATTGGAGGTCTCGCATTACACGTGTCTGTTGATCGATTACTGCCCCAGCGGCGACCTCCACTCTCTCCTACGTAAACAGCCCGGAAACCGGCTACCGGTCCAGGCGGTTCGGTTCTTCGCGGCGGAGATACTGGTAGCGTTGGAATATTTGCATGCACTTGGCATCGTGTATAGGGATCTGAAACCAGAGAACGTTCTATTGCGAGAAGACGGCCACGTCATGCTGTCCGACTTCGATTTGTGCTTCAAGGCCGACGTGGTCCCCACATTCGAGTGTCGTACAGGGCCCACTAAGAGGAAGAAGCGGGTGTGCAACTGTTTCAGAGGCGGCAGAGCGAGATCATCGCCGGAGCAACTCGTGGAAACGGAGTTCGTGGCGGAGCCAAGCGCGGCTTTCTCGAGGGCCTGCGTTGGTACGCACGAGTACTTGGCGCCGGAGTTGGTCTCGGGGAACGGCCACGGCAACGGCGTGGACTGGTGGGCGTTTGGGGTGTTCATCTACGAGTTGTTGTACGGGACGACGCCTTTTAAAGGGTGGAGCAAAGAGAGCACACTGCGCAATATAGCATCAAGTCGAAACGTGAGCTTCCACGTGGGGGAAGGAGAGGAAGAGGGAATGGCGGAAGCCAGGGATTTGATAGAGAAACTGTTGGTGAAGGACCCAAGGAGAAGGCTAGGATGCGCCAGGGGTGCGACGGATATTAAACGACACGCGTTTTTTAGCGGGATCAAGTGGCCGTTGATCCGAACCTACCGGCCACCGGAGGTTCGGGGGCTAATGATCAAGAAGGGGAGGTCACACGTGAGCAGTCACGTGACACATAGGAGAAGACGATGGTGGTGGAAGGGGCTTGACTATGTTCTTAATAAGAGAAATAATAAGGAATATAATAAATATAACTTAATCTCCAACTATAGCAACGGTAATTATTATCGTTACGTTAATAGTAATAATAAGGCTAGGAAATGTGCTTGA 1467 0.5344 MEDYTFFPPDTDLDLSFTSTTSSATDRTFASSSARTSLARSSLTLSFNERLSTASAATAGTSSSTLFLRPHRASDPHWSAIKAATTLSSDGALHLHHLKLLRHLGTGNLGRVFLCRLRDYDHANFALKVVDKDLLSSKKLSHVQMEGEILSMLDHPFLPTLYARLEVSHYTCLLIDYCPSGDLHSLLRKQPGNRLPVQAVRFFAAEILVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKADVVPTFECRTGPTKRKKRVCNCFRGGRARSSPEQLVETEFVAEPSAAFSRACVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGWSKESTLRNIASSRNVSFHVGEGEEEGMAEARDLIEKLLVKDPRRRLGCARGATDIKRHAFFSGIKWPLIRTYRPPEVRGLMIKKGRSHVSSHVTHRRRRWWWKGLDYVLNKRNNKEYNKYNLISNYSNGNYYRYVNSNNKARKCA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0488 488 Gene3D Phosphorylase Kinase; domain 1 98 181 - -
Lele10g0488 488 Pfam Protein kinase domain 100 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0488 488 SUPERFAMILY Protein kinase-like (PK-like) 78 421 IPR011009 -
Lele10g0488 488 PANTHER FLIPPASE KINASE 1-RELATED 36 422 - -
Lele10g0488 488 FunFam Serine/threonine-protein kinase OXI1 295 422 - -
Lele10g0488 488 CDD STKc_phototropin_like 105 420 - -
Lele10g0488 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lele10g0488 488 ProSiteProfiles Protein kinase domain profile. 98 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0488 488 FunFam Serine/threonine-protein kinase OXI1 182 250 - -
Lele10g0488 488 SMART serkin_6 98 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0488 488 Gene3D Transferase(Phosphotransferase) domain 1 182 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0488 Lele-ChrLele10 3482627 3484093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0488 1 486 AGC Kinase Gene Family AT3G14370 65.462 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele10g0488 Pkinase 1.2e-52 CL0016