Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0483 ATGAGTAATCCCCGTCAAAATTCCTCCGTATTCATGTCTCTATTTCGATCAATCAATTGTTATCGACTTGTTCTATTCTCTCTGCTGTTGCATTTGAACCGTCTAGCTGATCTAAACTTGGCCTGTGAATTGGAAGCTTCTGAGCAATATTTTACTGTAATAACACCTATCGAGTACCGCGCACCTGAACTTTTACTTGGATGGAATGACTATTCAATGGCGGCTGATATGTGGTCTGTGGGTTGTATATTTGGTGAGATGCTAATTGGGCAGACTTTATTTCGAGGTACTCCAACGGAAGATTCTCGGTCTGGAGTAACTGCACTATTTAGTTCAATTTCTTCCTTTCCCATATTTGAACGAATGGATTTGGCAGCAAAGTTCCCCGGTTTGAACCCAGATGGCCTTGATCTTCTTTCCCTCCTTTGTGGAAGAAAGAAATTCACGGTGGCGAACGAGGCAAGGAAGGAATACTTGAGATTATTTGAGGCTAGCTATTCAAATGTCCCCAAGATTAATCACTTCGCTGTTCAATTTGGGGTTAGACATGAAAGTATAATACTCTCTTCATACTTGATAGCAGAGTACTTTCAACCAGAAAACCATGGGGACCTTGCACTCTGTAATCCTCGGGATTAA 639 0.4147 MSNPRQNSSVFMSLFRSINCYRLVLFSLLLHLNRLADLNLACELEASEQYFTVITPIEYRAPELLLGWNDYSMAADMWSVGCIFGEMLIGQTLFRGTPTEDSRSGVTALFSSISSFPIFERMDLAAKFPGLNPDGLDLLSLLCGRKKFTVANEARKEYLRLFEASYSNVPKINHFAVQFGVRHESIILSSYLIAEYFQPENHGDLALCNPRD 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0483 212 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 34 113 - -
Lele10g0483 212 Gene3D Transferase(Phosphotransferase) domain 1 26 174 - -
Lele10g0483 212 SUPERFAMILY Protein kinase-like (PK-like) 34 143 IPR011009 -
Lele10g0483 212 Pfam Protein kinase domain 34 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0483 212 SMART serkin_6 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0483 212 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0483 Lele-ChrLele10 3441380 3445143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0483 34 160 Core Cell Cycle Gene Families AT3G48750 39.456 4.59e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele10g0483 Pkinase 1.6e-14 CL0016