Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0481 ATGTTTAGGGTTTTCATGGTTACTGGCTCGTCTTCAAGTTCTTTCCTTTTATGGGGTCTGGTTTTCCCTCCTTTTCCAGTGCTGGCGCCGTTTTGTTTCTGGGTCTATGAGAAGGTTTTGGTGATGGAGGATATAGGATTGTTCAAACAAGGTTGGCAATGGCTTCGATCGCAGAAGGATGCTTACTGGCGTGCCCGAACTGCGTTGAGTTGTTGCGGGGACAAAACTGCCATGTTCATCGAGCAACATTGGCCGTTAGTATGCAGTGCATGCTTCAGATTGGGAAGCATTCTTCGCCTATCGTTGCTTTATTGGAAAGACTGTTTTATGAGGGGCTTTCAGTCGTTCATCAAGCTGGGTCCAGCTATGCTTCTCCTCATAATGTGGTGTTGTCTTCTGAGTTTGACCTCGATGCATTGCTTGATTTATTTACTTATTAGTATGGGTGTTGCTGGAGCTGCTGTTCAGTACTTGGGTTATACTCCTGGCGTCTTCATTGTAGGGCTTTTTGCTATCCTTATGTTGTGGATGTATGCTAACTTCTGGATAACAGGAACGTTGCTTGTTGTTGGAGGTTATTTATTCTCCCTAAATCATGCACGCTTGCTGGTACTAATGGCAACCGTGTATGCTTTATACTGTGTCAAAGTTCGAGTGGGATGGCTCGGTGTTTTTCTGTGTGTAAACCTTGCATTCTTGTCCAACGACATTTTGAATTTCCTCCTCCAATGGTTTGATAATGTGAGTGAAAGCAGCTCGCATTCTGAAGATCAGAGACAATCAGAAACAGTTCTGGGGGATGACTATACAGAAGAGTGTGAATATTCCGTTCCTACTGCTGAATCTGAAAATTCACATTCATGTAAATCATCCAGCAAACCAGCTGTTACCACTTCAGTTGTTGAAAACAAGAAAGAGTTTTCAGATAGCAAAGTGGTGAAAGTACAAGCAGATTCTGTTGATGAAATGAGGAGAATATTGAATAGTCTGGATCATTATGATGCCCTTGGATTTCCTCGTCACAAGAAAGTTGATGCAGCAATTCTGAAAAAGGAATACCGGAAAAAGGCGATGCTTGTTCATCCTGATAAGAATATGGGCAGTCCTCGGGCAAGTGAATCATTTAAGAAGCTTCAATGTGCATATGAGGTTCTTTCTGATACCACAAAGAAGAGAGACTATGATGAGCAATTGAGGAAAGAAGAATTCAGGGCTAAAAGTGTCTGCCAGAAATCCTATGGTGCTTCACGTCAGGACAATTCTGATTATCGCTCTGAAGAATCCAGGCGTATACAGTGTACCAAGTGTGGCAATTCACATATATGGGTATGCACTAATAGAATTAAGTTGAAGGCAAGATGGTGTCAGGACTGTTGTCAGTATCATCAAGCCAAGGATGGAGATGGATGGGTTGAGTACAAAGGTTCTCTAGCTTTTGAGAGGGCTCAAAAGATGGAGATCCCTCGCGCTTTTGTTTGTGCGGAGAGCAAGATCTTTGATGTGTCAGAATGGGCCATTTGTCAGGGAATGGCTTGTAGGCCAAACACCCATCGACCGAGCTTCCATGTGAACATGGTTGGCCTGGAGAAAAGCCCGCGATGTAACTCCAGCCGATATCCATGGGATTTAGATGCTGAGATGATGCTCGACGAAGACGAAGAGGCATTTGAGCTGTGGCTTCAGCAGGCTCTCGCCTCTGGCATCTTCTGCGAGTCCTCCAAACGCCGGAAGAGCTGGAGTCCCTTCAAATTGCATAAGAAGAAAGGGAAGAAGCAGTGGCGAAGAACATCATGCTGA 1797 0.4435 MFRVFMVTGSSSSSFLLWGLVFPPFPVLAPFCFWVYEKVLVMEDIGLFKQGWQWLRSQKDAYWRARTALSCCGDKTAMFIEQHWPLVCSACFRLGSILRLSLLYWKDCFMRGFQSFIKLGPAMLLLIMWCCLLSLTSMHCLIYLLISMGVAGAAVQYLGYTPGVFIVGLFAILMLWMYANFWITGTLLVVGGYLFSLNHARLLVLMATVYALYCVKVRVGWLGVFLCVNLAFLSNDILNFLLQWFDNVSESSSHSEDQRQSETVLGDDYTEECEYSVPTAESENSHSCKSSSKPAVTTSVVENKKEFSDSKVVKVQADSVDEMRRILNSLDHYDALGFPRHKKVDAAILKKEYRKKAMLVHPDKNMGSPRASESFKKLQCAYEVLSDTTKKRDYDEQLRKEEFRAKSVCQKSYGASRQDNSDYRSEESRRIQCTKCGNSHIWVCTNRIKLKARWCQDCCQYHQAKDGDGWVEYKGSLAFERAQKMEIPRAFVCAESKIFDVSEWAICQGMACRPNTHRPSFHVNMVGLEKSPRCNSSRYPWDLDAEMMLDEDEEAFELWLQQALASGIFCESSKRRKSWSPFKLHKKKGKKQWRRTSC 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0481 598 PANTHER OS03G0832900 PROTEIN 38 593 - -
Lele10g0481 598 Pfam Cleavage inducing molecular chaperone 427 524 IPR032843 -
Lele10g0481 598 SMART dnaj_3 330 390 IPR001623 -
Lele10g0481 598 Pfam DnaJ domain 331 395 IPR001623 -
Lele10g0481 598 Gene3D DnaJ domain 317 418 IPR036869 -
Lele10g0481 598 SUPERFAMILY Chaperone J-domain 306 394 IPR036869 -
Lele10g0481 598 CDD DnaJ 331 387 IPR001623 -
Lele10g0481 598 ProSiteProfiles dnaJ domain profile. 331 398 IPR001623 -
Lele10g0481 598 ProSitePatterns Nt-dnaJ domain signature. 375 394 IPR018253 -
Lele10g0481 598 PRINTS DnaJ domain signature 353 368 IPR001623 -
Lele10g0481 598 PRINTS DnaJ domain signature 370 390 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0481 Lele-ChrLele10 3410514 3416411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0481 42 597 Miscellaneous Gene Families AT1G16680 69.589 0.0 763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0481 10 3410514 3416411 Lele11g0521 11 5176123 5188749 hybridization
Lele10g0481 10 3410514 3416411 Lele12g0798 12 16026658 16052728 hybridization