Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0480 ATGACGTCTTGTTTTTGTTTCTTATTTGGTAGGAAGGTTACACCTCCAGTGATAGGAGATCCTGAAATTGATGAAGAATTATCAGGTGTTCACAATCTTATTCTTTATGCCTACAAAGAACTAAGTATTGCCACCGAGGATTTCAGTCCAGCCAACAAAATTGGAGAGGGAGGCTTCGGTTCCGTCTATAAGGGAAAGCTAAAAGATGGAAAAATTGCTGCTATCAAAGTCCTTGCGGCTGAATCAAGTCAAGGGGTGAATGAATTCTTGACAGAAATCAAAGTGATCTCAGAAGTAGAGCATGAAAATTTAGTTAAGTTATATGGCTGTTGTGTGGAAGGCAATCACAGAATATTAGTCTACAATTACCTTGAGAATAACAGTCTTGCACAAACACTTCTAGGGACAATAGGTTATCTGGCACCAGAATATGCAGTAAGAGGGCAGGTTAATAGAAAAGCAGACATTTACAGTTTTGGTGTACTTCTTTTGGAGATTGTCAGTGGGAGATCTAATACAAATACGCGACTGCCAGCGGAAGAACAATACCTTCTAGAAAGGACATGGGGACATTATCAGCAAAGTATATTGGTAGGGCTGGTAGACACATCACTAAATGGGGAATTCGATGCCGAGGAAGCTTGCAAGTTTCTGAAAGTCGGCCTTCTTTGTACTCAGGAAGTTCCGAAACTCCGGCCATCCATGTCTACAGTGGTCGAGATGCTCACCGGTAAAATGGATGTCGATGACAGTAAGATAACAGAACCAGGCTTGATTTCTGACTTCATGGACCTCAAAGTTGGACGAAAACCAAGAAATGATGTTGATATGAAGGCATTATCTTCATATAATGCAACCTCTGCCTCAGACAACCAGGACACTACCATTTCATCGATCGCTTCAACCGCGGCTAGTACAACCTTTGCCACGCAATATGATCGTAGCATGTAA 951 0.4164 MTSCFCFLFGRKVTPPVIGDPEIDEELSGVHNLILYAYKELSIATEDFSPANKIGEGGFGSVYKGKLKDGKIAAIKVLAAESSQGVNEFLTEIKVISEVEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLLGTIGYLAPEYAVRGQVNRKADIYSFGVLLLEIVSGRSNTNTRLPAEEQYLLERTWGHYQQSILVGLVDTSLNGEFDAEEACKFLKVGLLCTQEVPKLRPSMSTVVEMLTGKMDVDDSKITEPGLISDFMDLKVGRKPRNDVDMKALSSYNATSASDNQDTTISSIASTAASTTFATQYDRSM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0480 316 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Lele10g0480 316 Gene3D Transferase(Phosphotransferase) domain 1 119 244 - -
Lele10g0480 316 Gene3D Phosphorylase Kinase; domain 1 22 118 - -
Lele10g0480 316 SUPERFAMILY Protein kinase-like (PK-like) 32 251 IPR011009 -
Lele10g0480 316 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 135 276 - -
Lele10g0480 316 Pfam Protein tyrosine and serine/threonine kinase 137 242 IPR001245 GO:0004672|GO:0006468
Lele10g0480 316 Pfam Protein kinase domain 51 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0480 316 FunFam cold-responsive protein kinase 1 20 123 - -
Lele10g0480 316 ProSiteProfiles Protein kinase domain profile. 48 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0480 Lele-ChrLele10 3402401 3405349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0480 125 248 Receptor kinase-like Gene Family AT1G53430 51.613 1.39e-32 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele10g0480 PK_Tyr_Ser-Thr 1.4e-06 CL0016