Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0476 ATGGAGATGGTTGGGGAGAGCAAGTATTCGTGCCAGACTGCTAGCGATACTCTCGCATGGATGCACGCCATCATCGACTTCATCACTCCCTACACCTTCTTAATCAATGCTCATGTCGTCAATTTCTTCAAGGATAAACTGTGGGAGGATGTTGACCAGGAATGGATTGATTGCCTGCGCAGAGAATCTGTTGAAAGTATCCTCTTGATTCCTTCCGGAGTAATCCAGGAGCACTGGCCTACATCTTTAAAGGTTTTCATCCAAAAATTGCAATCTATGGTGCTTCATCGAGAACAAGCAGACATACAAACGATATTACCTAGCATGCAGATGACTTCACTTAACAGCGTTCTTGCTCAGGGAATGAATTTGAAGAAAAAACATGAAGTAGAAATTCTTTCTGCTGTTGTTAGTTCAATTGCAAACAGTGTGAGAGCTCATACCATCATTGACGTTGGTGCTGGTCAGGGTTATCTTGCACAAGTACTTTCCTTTCAGTACCAGCATTCTGTTGTTGCAGTTGATGCATGCTCACATCATGGAAGTGTTACTGATGCACGGGCAGAAAAAATAAAAGAATACTATGCAGCTCAGATGAGAAAATCTGGATCATGTATACGAGATTTGAAAGGACCAAAGACAATTACAAGTCGTATATTGTCCACTGACATATTGAAAAACTTGACTGAAATGTCTTTGTGTGGAGATGACGATGACCAGTTGTCTAAGGGTAACAATCATGCAGATAATGTGAAGCTCCATTGTCCCAAATATGCAAATGAAAGAACTTCATTAGTTCTTGCTGGGCTTCATGCCTGTGGTGACCTTTCGGTCACTATGCTGAAGACTTTTTTAGAGCGCAAGGAGGTGAAAGCTGTGGTGAGTATTGGTTGCTGTTACAACTTGCTATCTGAAGAAAGGTTTTCAGATCCTGGATCTCAGTGTGGATATCCAATGAGTCATGCTTTAAGATCCACTGGCTCATGGCTTGGTAAGAATGCACGTGATCTTGCTTGCCAGAGTGCAGAGAGATGGAGGAGCCTGGAAATGGATGCTGGCATTCATAACTTCGAGTTGCATTCTTTTCGTGCTGCTTTTCAAATGATTCTTTCTAAATATTATCCTGAAGTTATGATGAATACTCCATCAATTGGACGTAAAGGGAAAGCTCTGCGCCGTCGACATCATAGAAGAGCTGTTGAGTCTCCAAGGCATCTTAATGAAATTACCTCATCACTGGCTATAGAACCATCACAATCAGAAACTGATAGGATTTTGGGCCCAGCAATGGGAAGACAGGCCTTACCGTGTCAATTTAGTTGTGGTGAAAGAGCTGGATGTGAGCAGACCAAATTTGGGGACAGATATTCGCTTTTTAAGAACTTCTGTAAATCTGGATTAGAACATCTTGGGATTAGACCTTCACATAATATAGACTTTCAAGAGATATGGAAGGAAGCGGAGCCATTTACTGATCTCATAGGACCTTATTGGTCTCTCAGAGCTGCTTTGGGGCCTCTTTTAGAAACCCTAATTCTTCTTGATAGACTGTTGTTTCTCCAAGAGCAAGGTAGTGTTTTGGATGCCTACTTAGTACCCATTTTTTATCCAAGCTTATCACCTCGGAATATGGCCATAGTTGCAAAAAAGATTGGCATGGGTTCGGAATCCTAA 1674 0.4188 MEMVGESKYSCQTASDTLAWMHAIIDFITPYTFLINAHVVNFFKDKLWEDVDQEWIDCLRRESVESILLIPSGVIQEHWPTSLKVFIQKLQSMVLHREQADIQTILPSMQMTSLNSVLAQGMNLKKKHEVEILSAVVSSIANSVRAHTIIDVGAGQGYLAQVLSFQYQHSVVAVDACSHHGSVTDARAEKIKEYYAAQMRKSGSCIRDLKGPKTITSRILSTDILKNLTEMSLCGDDDDQLSKGNNHADNVKLHCPKYANERTSLVLAGLHACGDLSVTMLKTFLERKEVKAVVSIGCCYNLLSEERFSDPGSQCGYPMSHALRSTGSWLGKNARDLACQSAERWRSLEMDAGIHNFELHSFRAAFQMILSKYYPEVMMNTPSIGRKGKALRRRHHRRAVESPRHLNEITSSLAIEPSQSETDRILGPAMGRQALPCQFSCGERAGCEQTKFGDRYSLFKNFCKSGLEHLGIRPSHNIDFQEIWKEAEPFTDLIGPYWSLRAALGPLLETLILLDRLLFLQEQGSVLDAYLVPIFYPSLSPRNMAIVAKKIGMGSES 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0476 557 PANTHER CGI-41 METHYLTRANSFERASE 8 550 - -
Lele10g0476 557 Pfam Methyltransferase domain 125 306 IPR025714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0476 Lele-ChrLele10 3359830 3369053 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0476 10 3359830 3369053 Lele10g0476 10 3359830 3369053 ECH
Lele10g0476 10 3359830 3369053 Lele11g0517 11 5134926 5145201 hybridization
Lele10g0476 10 3359830 3369053 Lele12g0803 12 16095576 16102309 hybridization