Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0467 ATGAAATCGAGCGGCGACAAAGATAAAAATCGAGGCGTCAGCTTGCAAATGAACAACCTCCATCAGCGTCTTCTTCATGTATTGAACCTCGGCACCAGATATTTTGACGAGAGGACAAACCAATGGAAATGGCAGAGCGCAAACATTGAAGTACAGAAACAAGTTATACGCTCAATTGATGTGTTTCTTGATTTTGTATCTGGCGATGCGCGTGCAGCGCATCATACTATTGTAAAGGATTCTGTTGCTGATATTTTGGGAGCATTATTGTGGATTCTTCAATGCAAAAGTAGACCCTTGTTATGTATGGCAGCAAATGTAGCTGTAAAGTTAATTAGTAGTGTTTTACCCAATTCAATATTGGAATCTTATATACTAGATCTTGTCCATGCTCTATCATCCTTGCTATCTTCACCTTTTGTAGAAGTTGCAATACCCTGTTCTACTTCTTTGAATTTGGTAATTTCAAATTTAAATGCCAGTAGTGCGAAGGCAGTTTGGGAGGTACTGAAACAAACAGAATGTATCATTCATATTGTGGGCAATATACACAAATTTGTTGGAGGTGAAAGTCCAATCAAAATTGAATATTTCGAACAGATGTCTTCACTTTTGGGCTCGATATTGTTGTGGTGGCCTCCAACTCGGTTTCCTGTTTGGAATGATGTTAAACTGATAAATACTTTGTCAGATATGTATGCAAGGACAGATGATTCTACCAAACTTGTAATTTTGAAGCTTTACACATCTTTAGCTTTATGTGGATCTGTGGCCAAAGAACTCATAGAGAATGGAAAAGCCTTTCTACAAATGGTTGTGCAATCCATGGGAAAATCGTACCCTGATGCTGTGAGAATAGAAGGCTTTAGGCTTGCTCAATGTCTATTGAGATCCCAAGAGAATTGTATGAAAGTGATGGATACATGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGGAAGAAACAGGGATGCAGTCTAGAAAATTTGTAAACAAGAATAGTTCTATATTGGTGGAAGCATGTCGATTGGCTTTAGTAACTCGTTGGGCAGGTTATCATCATATTAGTTTTTGGAAGAAAAGAATTGATAGAGTCCTCCTTAATCTTTTGATAGAAAACATTCAAGATTTATCAGAGGAACATGTCTCATCATTGGACAAACAAATATCCATCGCAAAGGAGGGTTTAAAAACCAATCATCAGTTTTGTGTGAGGGGTTATGTGTGGGACATTCTTGGTTGGCTTACAATACATTCTGGAGAAAATTTCAACCCTTTTATCCATGGAAGTGAGCTCTACATCAACTTAATTATCATATGCGCATGCTTAACTTTTGAGGATGTGATTAAGAAATGGTGCCGCATATATCACAAGGATGTTGATGATAGTTTTCAGAGTGAACCAGCAGCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTAATTACATTTCATCCCAAGCCAGACTCATATTTTCTGAGACATACTCTTCAGATCATTTCAGAAACTTAGTACATACGCTGGAATATACATCATCACTTGAAAGTTATGGTTCATTTGATAAGATCCAACTTATTATCAACTTGATTGGATTGATCGCTTTTTTAAGTTTACCACATCAGCATGCACTTGAAAGCAAATATATAAAGTCCGTTGCTTTCTTAGTAAAACGATGCTTAGGCAATGATATTGATATATCAAGGTTCGGCTTGGCTCCTCATTTGCACACTACATTATATGAAAAATCCTGTTGTTGGATAGATGCAGACGATTGGGAAGGTTCTAATATTCTCTTGTTTTATGGTTTGTGGGGCTTAGCTGAAATGGTCCATCAATCTACTTCTTTACAAAATACTTCCCACATATCTACTGTTGACATGCAATATTTTGAAGGTCAATTAATTAGCGAACTCCTTGAGATTTGCAGTAATGCCTCTTTTACTCATGGTTTAAGATGGTATGCAGCTTATATTCTTAGTCATTTTGGAATTTATGGTTTCCCAAATGAACTAGGCAAAAGGGTTGGGAGATGTCTTGATGAGAAAGAATATGCAGATATTCAACTCATTGTGGCAAATGGCAATACTTTGAGTGTTCATGGAGTTATTCTTGCTGTTCGATGCTCGTCATTGCTCCCTCCTGAAGTCTTACTTGTTAAGGAAAAAAGAATCGATGACCAACCCATTAGGGAAGTTCGTTTATCTTCTCATGTTGATTATGAAGCATTAGTGAAGTTGTTGGAGTATGTGTACGTGGGATACTTTCATGCCGGTGAAGAAATTGTAAAGAAGTTGAAAATTCTTGCTAAGCGCTGCAATCTGCAGCCTCTCTTGCGAATGCTTCATAGACAAAGTCCAAAGTGGGGCACATCGTTTCCCAGCTTTGATCTCACTTCATCTCTTGTTTCAGCTGGAAGTTGTTTTTGGGATGTTATATTGGAATCTAAACAAGATAAACTTGAAAGATGGACATGCTGTATATGCTCTCATTCAGTTCTACATTTGCATGTTCATAAAGTTGTATTACAGTCTGGCTGTGATTATTTGCTAGGCTTGTTTCGTTCAGGAATGAAAGAGAGTCATTCACAAATCATAAAGGTTCCCATTAGTTGGGAAGCGGCGGGTAAGCTTGTGCACTGGTTCTATTCCAATGAGCTTCCAAAGCCTCCATGCGGATGTTTGTGGGATAATATGGATGATGAGCAAAAACTAATGAGTTTAGAATCATACGTGGAGCTTTATTGGCTTTCAGAATTCTGGATTTTAGAAGATGTTCAAGAAGCTTGCTGGAATGTGATTCTATCATGTCTTGATAATGCAAAGCAGCTGTCCATTAAAATACTTAAAATGGCTGGCAACCTCTCTTTGTGGAAATTAGCTGATTTAGCAGTTACTCACTTGGCTCCTTCATATAGTCAATTGAGAGATTCTTGTGAACTTGCAGATTTGGATGATTCTCTTGTTCACTTAATTTGGTCTGCTTCTACTCAACTTAGCCAAAATGGATGA 3015 0.3771 MKSSGDKDKNRGVSLQMNNLHQRLLHVLNLGTRYFDERTNQWKWQSANIEVQKQVIRSIDVFLDFVSGDARAAHHTIVKDSVADILGALLWILQCKSRPLLCMAANVAVKLISSVLPNSILESYILDLVHALSSLLSSPFVEVAIPCSTSLNLVISNLNASSAKAVWEVLKQTECIIHIVGNIHKFVGGESPIKIEYFEQMSSLLGSILLWWPPTRFPVWNDVKLINTLSDMYARTDDSTKLVILKLYTSLALCGSVAKELIENGKAFLQMVVQSMGKSYPDAVRIEGFRLAQCLLRSQENCMKVMDTCGEALVDAIICGMEETGMQSRKFVNKNSSILVEACRLALVTRWAGYHHISFWKKRIDRVLLNLLIENIQDLSEEHVSSLDKQISIAKEGLKTNHQFCVRGYVWDILGWLTIHSGENFNPFIHGSELYINLIIICACLTFEDVIKKWCRIYHKDVDDSFQSEPAARAVLMMIYSPCNYISSQARLIFSETYSSDHFRNLVHTLEYTSSLESYGSFDKIQLIINLIGLIAFLSLPHQHALESKYIKSVAFLVKRCLGNDIDISRFGLAPHLHTTLYEKSCCWIDADDWEGSNILLFYGLWGLAEMVHQSTSLQNTSHISTVDMQYFEGQLISELLEICSNASFTHGLRWYAAYILSHFGIYGFPNELGKRVGRCLDEKEYADIQLIVANGNTLSVHGVILAVRCSSLLPPEVLLVKEKRIDDQPIREVRLSSHVDYEALVKLLEYVYVGYFHAGEEIVKKLKILAKRCNLQPLLRMLHRQSPKWGTSFPSFDLTSSLVSAGSCFWDVILESKQDKLERWTCCICSHSVLHLHVHKVVLQSGCDYLLGLFRSGMKESHSQIIKVPISWEAAGKLVHWFYSNELPKPPCGCLWDNMDDEQKLMSLESYVELYWLSEFWILEDVQEACWNVILSCLDNAKQLSIKILKMAGNLSLWKLADLAVTHLAPSYSQLRDSCELADLDDSLVHLIWSASTQLSQNG 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0467 1004 SUPERFAMILY ARM repeat 47 491 IPR016024 -
Lele10g0467 1004 PANTHER OS06G0674800 PROTEIN 6 1003 IPR044953 -
Lele10g0467 1004 SUPERFAMILY POZ domain 836 936 IPR011333 -
Lele10g0467 1004 SMART BTB_4 824 939 IPR000210 GO:0005515
Lele10g0467 1004 SMART BTB_4 687 791 IPR000210 GO:0005515
Lele10g0467 1004 ProSiteProfiles BTB domain profile. 811 892 IPR000210 GO:0005515
Lele10g0467 1004 Pfam BTB/POZ domain 835 899 IPR000210 GO:0005515
Lele10g0467 1004 Pfam BTB/POZ domain 681 781 IPR000210 GO:0005515
Lele10g0467 1004 ProSiteProfiles BTB domain profile. 687 761 IPR000210 GO:0005515
Lele10g0467 1004 CDD BTB_POZ_ZBTB_KLHL-like 836 888 - -
Lele10g0467 1004 Gene3D Potassium Channel Kv1.1; Chain A 669 786 IPR011333 -
Lele10g0467 1004 Gene3D Potassium Channel Kv1.1; Chain A 805 979 IPR011333 -
Lele10g0467 1004 SUPERFAMILY POZ domain 667 783 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0467 Lele-ChrLele10 3324625 3328916 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele10g0467 BTB 1.7e-05 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0467 10 3324625 3328916 Lele12g0811 12 16140087 16145731 hybridization