Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0460 ATGGTGAAGTTCTTACGACCAAGCAAGGCGGTGATCGTTCTTCAAGGCCGTTTCGCCGGCCGGAAGGCTGTCATCGTCCTCAACTTCGACGACGGAACCCGAGACCGCCCTTACGGCCACTGCCTCGTCGCCGGCATCTCCAAGTACCCACAGAAAGTAATCCGCAAGGACTCCGCCAAGAAGTCCCGCGTCAAAGCCTTCATCAAGGCCGTTAACTACAGCCACCTCATGCCCACTCGCTACACTCTCGACGTCGATCTCAAGGACGCCGTCTCCCTCGACGCCCTTGAATCACGCGACAAGAAGGTCACGGCGGCCAAGGAGATCAAGAAGAGATTCGAGGGGCGGTTCAAAACCGGCCAGAACAGGTGGTTCTTCTCCAAGCACTTAAACCGGGTTTTAATCGGCCCTGTTCTCTTTCCCATTGTTGATTTTGCTTGA 441 0.5578 MVKFLRPSKAVIVLQGRFAGRKAVIVLNFDDGTRDRPYGHCLVAGISKYPQKVIRKDSAKKSRVKAFIKAVNYSHLMPTRYTLDVDLKDAVSLDALESRDKKVTAAKEIKKRFEGRFKTGQNRWFFSKHLNRVLIGPVLFPIVDFA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0460 146 Pfam Ribosomal L27e protein family 54 128 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lele10g0460 146 Gene3D - 1 130 IPR038655 -
Lele10g0460 146 FunFam 60S ribosomal protein L27 1 131 - -
Lele10g0460 146 CDD KOW_RPL27 6 84 IPR041991 -
Lele10g0460 146 SUPERFAMILY Translation proteins SH3-like domain 3 127 IPR008991 -
Lele10g0460 146 PANTHER 60S RIBOSOMAL PROTEIN L27 1 129 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0460 Lele-ChrLele10 3281007 3281447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0460 1 128 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 73.485 6.80e-68 200