Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0450 ATGGGTGGCGAAGAAGAATTCAGGAAGAAGGAAGAGTTTATGGAAGACGATGATGATGATGAAGTTGAACTTCCAGGGTTTCGGTTTCATCCCACAGATGAAGAACTCGTAGGTTTCTATCTTCGAAGGCAGCTCGACAAGAAACCAATCAGAATCGAACTCATCAAGCAAATCGATATCTACAAATACGATCCTTGGGACCTTCCAAAAGCGAGCTGCACAGGAGGGGAAAAGGAGTGGTATTTTTTCTGTAAGAGAGGGAGGAAGTACAGGAACAGCATAAGGCCAAATAGAGTGACAGGATCAGGGTTTTGGAAAGCTACAGGGATAGACAAGCCTGTGTATTCTCTTGCTGGACAAGGCAGTGATTGCATTGGCCTCAAGAAAACTCTTGTTTACTACAGAGGCAGTGCAGGTAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTCCCTTCTCATCAAGAGGCCGCCGCCGCCACCACCATTGCCCAAGAAGCTGAAATCTGGACATTGTGTAGAATTTTCAAGAGAAATGTTCCACCAAGGAAGCCCATAACAGATTGGAGATCATCACAAGCAGTTACCAAACGTCAATATTTTTCAGTAGTCGACACTAACACATCATCGAGACTTATTAAAAGCACCATGGAGAGTGATCATCATGCTAACTACGACAATGATAACAAAGAAGCTTACATCAATTTTGGAGGAAGCAATCATCATCATCATGACCACTATTATTCTCATCAGGTTAGTCGTCATCATCATCATCATGAGCAGAAACCAGCAGTCTTCGATAACATTGATCAGAGGAATAATAATAATAATAATCAGTTCATGATGGTGATGAACTCCCAGCAAGCAGCAGCACAACAACAACAACAACAACAACAGCCACAATTATTCACTGCTTCATCTTCGTCGTCTTCTTCTAACTTGCGGATTAATCATAACCCTAATCCTGCTGCTGCCAATGATTTCCTCACCTATGAGAATTGGGATGAACTTGGATCAGTTGTCAAGTTCGCTCTTGATTCCTCCATCATGTAA 1059 0.4259 MGGEEEFRKKEEFMEDDDDDEVELPGFRFHPTDEELVGFYLRRQLDKKPIRIELIKQIDIYKYDPWDLPKASCTGGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSLAGQGSDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSHQEAAAATTIAQEAEIWTLCRIFKRNVPPRKPITDWRSSQAVTKRQYFSVVDTNTSSRLIKSTMESDHHANYDNDNKEAYINFGGSNHHHHDHYYSHQVSRHHHHHEQKPAVFDNIDQRNNNNNNQFMMVMNSQQAAAQQQQQQQQPQLFTASSSSSSSNLRINHNPNPAAANDFLTYENWDELGSVVKFALDSSIM 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0450 352 Gene3D NAC domain 32 182 IPR036093 GO:0003677|GO:0006355
Lele10g0450 352 FunFam NAC domain-containing protein 35 32 183 - -
Lele10g0450 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 308 - -
Lele10g0450 352 ProSiteProfiles NAC domain profile. 23 180 IPR003441 GO:0003677|GO:0006355
Lele10g0450 352 MobiDBLite consensus disorder prediction 288 321 - -
Lele10g0450 352 MobiDBLite consensus disorder prediction 1 22 - -
Lele10g0450 352 Pfam No apical meristem (NAM) protein 25 153 IPR003441 GO:0003677|GO:0006355
Lele10g0450 352 SUPERFAMILY NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0450 Lele-ChrLele10 3201901 3203903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0450 20 180 NAC Transcription Factor Family AT5G39820 58.427 3.08e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele10g0450 NAM 3.2e-35 No_clan