Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0447 ATGAGAGAGGGTGCTAGATCAAAGCAAGGTACAATGTCGCCATGTGCAGCGTGCAAGCTTCTGAGAAGAAGATGTGCACAGGACTGTGTGTTTGCTCCTTATTTTCCAGCAGATGAACCCCAGAAATTTGCCAGTGTTCATAAGGTTTTTGGAGCTAGCAATGTCAACAAAATGTTACAGGAACTACCAGAGCACCAACGAAGCGATGCAGTGAGTTCAATGGTATATGAAGCAAACGCAAGAGTGAGAGACCCTGTGTATGGCTGTGTTGGAGCCATATCCTCTCTGCAACACCAAGTCGATGTTCTTCAAACCCAACTGGCTCTTGCTCAAGCCGAAGTTGTTCACATGAGATCTCTCAGTCATCATCAGTTGTCTTCAACATCACCATCATCACCACCACCAACAACTGAGACTGTAGCAGTGCCAAATTACACATCATCGTCAGATCATCACAGTCACTTCAACAATATTATGTCTCCTTCATCGTTAAGCAGGCTCAGTTCCAAGTCCTTTTTTGCCATGGACGTCGGCGAGTCTCTGTGGTCCTGCTAG 555 0.4613 MREGARSKQGTMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQHQVDVLQTQLALAQAEVVHMRSLSHHQLSSTSPSSPPPTTETVAVPNYTSSSDHHSHFNNIMSPSSLSRLSSKSFFAMDVGESLWSC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0447 184 MobiDBLite consensus disorder prediction 121 148 - -
Lele10g0447 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 147 - -
Lele10g0447 184 Coils Coil 93 113 - -
Lele10g0447 184 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Lele10g0447 184 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0447 Lele-ChrLele10 3161207 3165342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0447 1 184 AS2 family AT1G31320 62.366 5.14e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele10g0447 LOB 1.4e-43 No_clan