Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0442 ATGAGAGAGCGCGTTGAGTTTCTTCAGAAGGTGAGCTTAACCATTGATGACATTAATGAGTATCCTTTGATGCTGGGATGCAGTGTGAGAAAGAACATCCTACCTGTATTAGGGTACGTAGAAAAAATTGGGATTCCAAGGTCAAAGCTTGGTGAATTCATAAAAATGTATCCACAAGTTTTACATGCGAGTGTGATTGTCGAGATAGCTCCGGTTATTAAGCTCCTAAGAGAACTTGATGTGGAGAAACAGGACATTGGATTTGTGTTGCAAAAGTATCCTGAGCTTTTGGGGTTCAAGCTTGAGGGTACGATGAGTACTTCGGTGGCTTATCTTGTTAGTATCGGTGTCAATCCGAGAGATATCGGTCCCATGATGATGCAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTGTGATTATACCTCTGACTGATTACTTGGTCTCTTTAGGACTGCCCAAGAAAATTATAGCTAGAATGTTGGAGAAGAGACCCTATATACTCGGTTACGATCTTGAGGAGACTGTTAAACCTAATGTGGATTGTTTAATTAGTTTTGGAATTAGGAAGGAATCGGTGCCTTTAGTTATTGCTCAGTATCCGCCGATCCTCGGGCTGCCTCTCAAGGCTAAGTTGTCTTCACAGCAGTACTTCTTCAGTTTGAAGCTTAAGATCGACCCCGAAGGATTCGCGCGAGTGATAGAGAAGATGCCACAGGTGGTTAGCCTTAATCAACCTGTGATAATGAAACCGGTTGAGTTCCTCCTCGCGAGGGCAATACCGTCGCATGATGTAGCCAATATGGTGATCAAATGTCCTCAATTAATAGCAGCAAGAGTTGAGCTTATGAAGTACAGTTTTTACTTCTTCAAGAGTGAGATGGGGAGACCCATAAAAGAGCTTGTGGAATTTCCAGAATACTTTACATATAGCTTGGAATGCCGGATCAAACCCAGATACCAGAGGATGAAAAGCAAGGGGATAAGGTTTTCATTAAATTGGATGCTAAATTGTAGTGACCAGAGATTTGAAGGTAGATTGCAAGGTATGGGTGGCAAGTTAGAGCTACCAGTTCTGTCTATTCTTTATGTTCCACTGTATTGGTGGATGATCAAGAGTTTTGGAATTCCCACGATCAAACCATTCCTGAGTCCTGATTCATATTCTGAAGAACCAGTGGTGGACAAAGAACATCGGAATCTTCATTCCGGCTACTGCTCATTCTAG 1230 0.4228 MRERVEFLQKVSLTIDDINEYPLMLGCSVRKNILPVLGYVEKIGIPRSKLGEFIKMYPQVLHASVIVEIAPVIKLLRELDVEKQDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMMMQYPYFLGMRVGTVIIPLTDYLVSLGLPKKIIARMLEKRPYILGYDLEETVKPNVDCLISFGIRKESVPLVIAQYPPILGLPLKAKLSSQQYFFSLKLKIDPEGFARVIEKMPQVVSLNQPVIMKPVEFLLARAIPSHDVANMVIKCPQLIAARVELMKYSFYFFKSEMGRPIKELVEFPEYFTYSLECRIKPRYQRMKSKGIRFSLNWMLNCSDQRFEGRLQGMGGKLELPVLSILYVPLYWWMIKSFGIPTIKPFLSPDSYSEEPVVDKEHRNLHSGYCSF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0442 409 Gene3D Transcription termination factor 3, mitochondrial 1 141 IPR038538 -
Lele10g0442 409 Gene3D Transcription termination factor 3, mitochondrial 142 351 IPR038538 -
Lele10g0442 409 PANTHER CGI-12 PROTEIN-RELATED 41 347 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 FunFam Transcription termination factor mterf4, chloroplastic 1 138 - -
Lele10g0442 409 FunFam Transcription termination factor MTERF4, chloroplastic 139 352 - -
Lele10g0442 409 Pfam mTERF 37 345 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 299 330 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 159 190 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 51 82 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 195 227 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 232 262 IPR003690 GO:0003690|GO:0006355
Lele10g0442 409 SMART mt_12 15 46 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0442 Lele-ChrLele10 3128091 3129607 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele10g0442 mTERF 7e-100 No_clan