Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0439 ATGGGGAAGAAGCAGAAGGTGATTCTGCCGCCGGAACTCCCTCCGGAGATTTCGGAGGACGAAATTGAAGTTTCCGATGAAGACCTGGATTTCGTCCGGGAGAACCGCGACTATGCTGGCTTGATTTCAACCTTGGACACCCAGTCCATTACCAAACATGTGACTCGAGTTGCTGATGCCAAAGAGGATGACTTGGAGGCCCTTTATGAGAAACGCATGAGAAAGAATGCTCTGAAGAAAGAAACAGAGGAAAGTAGTGTTCAAGTTGATCGTGTAGAGGCTCTTCCTGTGAAGACCTTAGATGGAAAACTCTACTACCGAACAGTTTCAAAGACAGAAAATGGTGCAGCTGAAGAGGAAATTGGAGACAATGATGATAATGCGGATAAAGGTTTAGTGAAGCTAAGTAAGGCTGAAAAGAGAGCTAAACTCAAGAAAATGCGAAAAGAGGCAAAGAAGCAAGGGAAAGAAGTGGCTGATACCGAGGTGCAGCCAGCACCCCAAGCAGCAGTATTGGCTGAGGTAAAACAAGATCTTACTGCTGAGGAGGCACTTGAAAATAAGAAACTTAAGCTTGCAGAGCTTGGAAATGCCTTGCTTACAGACCCAGAATCTAATATTAAGTTGCTGAAAGAGATGATTCAAATCTCCAAGGAAAATGATCAGAGCATTGTTAAACTTGGACTGCTATCACTCTTGGCTGTTTTCAAAGACATTATTCCTGGTTATCGTATTAGGCTGCCCACTGAAAAGGAATTAGAAATGAAGGTTTCAAAAACTGTCAGAAAGATGCGTTATTATGAGTCCACTCTTCTTTCAGCATACAAGGCATACCTCCAAAGGCTGATAGACCTAGAACATCAGCCCTTATTTCAGCATGTTGCTGTTCGTTGTATTTGTACCTTGCTTGATGCTCATCCACATTTCAACTTTCGTGAAATCTTGTTGAGCACTGTTGTCGGGAACATAAGTTCTACAAATGATGCTATAAGAAAACTCTGCTGTTCTACAATTAAGTCTCTATTTACAAATGACGGTAAACATGGTGGTGAAGCTACTGTAGAGGCTGTTCGGCTGATTGCTGATCAAGTTAAAGCTCATAATTGTCAACTACATCCTGAATCCATTGAGGTTTTCCTGTCTCTTTCATTTGATGAGAATCTAAGGAAGTTTGAAAAGACAGACGATGATCATAAAGCAAAAAACAAGAAAAATAAGAAAAGAAAAAATATGGATGCATCAAATCAATTGCAACAGAATGAAAGAAAGAAAAGTAAGCAGGAATTGATGTCAAAGATGAGAGAGCAGGTTGAAGCTGATTACAAGGCTGCATCTTTTACACCAGATGCTATGGAACAGAGACAAATGCAATCTGAAACACTATCTGCAGCGTTTGAGACATATTTTCGTGTTTTAAAGCACACAATGGAGTCCACAGCTATAAGACCTGAAGAAAATTCTGGGACATCATCTGATGCAGTTGGATCCCACCCATTGCTTGCTCCATGTCTTAAAGGACTTGGAAAATTTTCGCATCTGATTGACCTTGATTTCATGAATGATCTTATGATCCATCTGAAAAAGCTTGCTTCTGGTGGTAGCAACTCAAGCAACACTTCTGAGAAGTTTACTAAATGTTTGACTGTATCTGAGCGTCTCCAGTGCTGCATTGTTGCTTTTAAAGTGATGAGGAATAATCTTGACGCCTTGAATGTTGATTTACAAGATTTCTTTGTCCATCTTTACAATCTTTTACTTGAATACAGGCCAGGAAGAGATCAAGGAGATGTGTTAGCAGAAGCGTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAGACTGCTGCATTTATAAAACGTCTGGCTACAATTTCATTGTCTTTTGGATCTCCAGAGTCCATGGCCGCATTAGTCACAGTGAAGCATCTCCTTCAGAAGAACGTGAAGTGCAGAAATCTGTTAGAAAATGACACTGGAGGAGGCTCTATTGCGGGCATGATTCCAAGATACCAACCAAATTCCAGAGACCCCAGTTTAAGTGGTGCTCTCGCCTCGGTATTGTGGGACCTCAATCTTCTGTCCAAGCATTATCATCCAACTATATCCACAATGGCCTCTGGCATTTCAAGCATGAGTAGTGCTCATAACCAAGTTTTTCTCTCCAATATTTCTCCTCAACAAGCTTTCAAGGACATGTCCCTTGAACAAGAACTTCTTTCCCCACAAAGTGGCAGTATGAAGCTAAATATCAAGAGGAAAAGAGCAAATGGAGCTACCCCATCTCCTTCAATTGGATCTACAGCAGATTCAAGTTCATTTGATGAGGATGAGTTGAAGAAGAAACTTGCTTCCCATTTTATGATTCTGCACGACATTAAGGAGAATGAAAGATTGAGAAGGGAGTTGGATAAGACTACGCTGTCTCTTGAGCTTTATAAACAGTATAAGAAACAAAAGAAGAAAGGATCAAAGACTAAAAAAGCAAAGCTTAGTGATGAGGCGTGA 2514 0.4069 MGKKQKVILPPELPPEISEDEIEVSDEDLDFVRENRDYAGLISTLDTQSITKHVTRVADAKEDDLEALYEKRMRKNALKKETEESSVQVDRVEALPVKTLDGKLYYRTVSKTENGAAEEEIGDNDDNADKGLVKLSKAEKRAKLKKMRKEAKKQGKEVADTEVQPAPQAAVLAEVKQDLTAEEALENKKLKLAELGNALLTDPESNIKLLKEMIQISKENDQSIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLIDLEHQPLFQHVAVRCICTLLDAHPHFNFREILLSTVVGNISSTNDAIRKLCCSTIKSLFTNDGKHGGEATVEAVRLIADQVKAHNCQLHPESIEVFLSLSFDENLRKFEKTDDDHKAKNKKNKKRKNMDASNQLQQNERKKSKQELMSKMREQVEADYKAASFTPDAMEQRQMQSETLSAAFETYFRVLKHTMESTAIRPEENSGTSSDAVGSHPLLAPCLKGLGKFSHLIDLDFMNDLMIHLKKLASGGSNSSNTSEKFTKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFVHLYNLLLEYRPGRDQGDVLAEALKIMLCEDKQHDMQKTAAFIKRLATISLSFGSPESMAALVTVKHLLQKNVKCRNLLENDTGGGSIAGMIPRYQPNSRDPSLSGALASVLWDLNLLSKHYHPTISTMASGISSMSSAHNQVFLSNISPQQAFKDMSLEQELLSPQSGSMKLNIKRKRANGATPSPSIGSTADSSSFDEDELKKKLASHFMILHDIKENERLRRELDKTTLSLELYKQYKKQKKKGSKTKKAKLSDEA 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0439 837 PIRSF Noc3 1 809 IPR016903 -
Lele10g0439 837 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 816 IPR016903 -
Lele10g0439 837 MobiDBLite consensus disorder prediction 756 775 - -
Lele10g0439 837 Coils Coil 137 164 - -
Lele10g0439 837 Pfam Nucleolar complex-associated protein 188 278 IPR011501 -
Lele10g0439 837 MobiDBLite consensus disorder prediction 393 430 - -
Lele10g0439 837 Coils Coil 403 435 - -
Lele10g0439 837 Pfam CBF/Mak21 family 553 708 IPR005612 -
Lele10g0439 837 SUPERFAMILY ARM repeat 208 623 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0439 Lele-ChrLele10 3089477 3096381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0439 1 805 Core DNA Replication Machinery Family AT1G79150 58.701 0.0 912