Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0436 ATGGGAAAAGGAAGAGCTCCATGCTGTGATAAGAACAAAGTGAAGAGGGGACCTTGGAGTCCTCAAGAAGATCTTAAACTCGTCACCTTCATCCAGAAACATGGCCATCACAATTGGCGTTCCCTCCCCAAACAAGCAGGGCTTCTTCGATGTGGAAAAAGCTGTCGCCTGAGATGGATCAACTACCTAAGGCCTGATGTTAAGAGAGGCAGCTTCACAAAAGAAGAAGAAGACACCATCATAAAGCTCCATCAGACCTTAGGAAACAAGTGGTCAAAAATTGCGTCGGAGTTGCCTGGTAGAACAGACAATGAGATCAAGAATGTGTGGCACACCCACCTGAAGAAGAAACTACTGAAGAACAAGAACAGTTCAGATAATGATGATCAATCCAAGCAAGAATCATGCATAACCTCTTCATCATCTTCATCTTCCTCAACATTAATTCCTCAGAAAACTACAGACAATATTAATGACCAAAACTCGGAAAATCTTAATAAAAATCAGTCCTCATCACCACCAAATTCCTTTCAATGTTCTACTGATCAATCATCACCAACACCTATCTGCAAAATACAAGACGATCATCATCATCAGTTGGAACAAGTGGCAGTAGGTTCTTCTTCATTGTATCAAGGAACGGGGGCAGCAGATGATAATGATAATAATTATAGTAATACTAAAGTACTAAACGAGGTTGTTGACAAGCCAACTAATGATAACAGTACCAGTAGTGGTTTGCTTGAAATACCATTATTGGAGGCAGACGATGATTTTTGGAACATGTTGGAAGATGACAACATGGGAGGAGGAGGAGGATCCTTTGTTGTGTCAAATAATGATAATCATCAGGTTCATTATTCAGATGCTGAAACTATGAAGTACTGGATCAGGGAGATTGAGAAGGATCTTGGATTGGAACCTCAAGCATCATCGTCATCATCATCATCTGATCTAACCATGGCATTGTCTGATGTAGACATATGGCTTAATGGTAGTTCTGGTTTCTGA 1011 0.4055 MGKGRAPCCDKNKVKRGPWSPQEDLKLVTFIQKHGHHNWRSLPKQAGLLRCGKSCRLRWINYLRPDVKRGSFTKEEEDTIIKLHQTLGNKWSKIASELPGRTDNEIKNVWHTHLKKKLLKNKNSSDNDDQSKQESCITSSSSSSSSTLIPQKTTDNINDQNSENLNKNQSSSPPNSFQCSTDQSSPTPICKIQDDHHHQLEQVAVGSSSLYQGTGAADDNDNNYSNTKVLNEVVDKPTNDNSTSSGLLEIPLLEADDDFWNMLEDDNMGGGGGSFVVSNNDNHQVHYSDAETMKYWIREIEKDLGLEPQASSSSSSSDLTMALSDVDIWLNGSSGF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0436 336 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Lele10g0436 336 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lele10g0436 336 CDD SANT 71 113 IPR001005 -
Lele10g0436 336 FunFam Transcription factor RAX3 9 69 - -
Lele10g0436 336 Gene3D - 16 68 - -
Lele10g0436 336 CDD SANT 18 63 IPR001005 -
Lele10g0436 336 FunFam MYB transcription factor 70 145 - -
Lele10g0436 336 Gene3D - 70 142 - -
Lele10g0436 336 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele10g0436 336 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Lele10g0436 336 MobiDBLite consensus disorder prediction 120 191 - -
Lele10g0436 336 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lele10g0436 336 MobiDBLite consensus disorder prediction 130 190 - -
Lele10g0436 336 SMART sant 15 65 IPR001005 -
Lele10g0436 336 SMART sant 68 116 IPR001005 -
Lele10g0436 336 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 233 - -
Lele10g0436 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lele10g0436 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0436 Lele-ChrLele10 3055084 3057303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0436 1 118 MYB Transcription Factor Family AT1G56160 88.983 5.15e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0436 Myb_DNA-binding 7.1e-14 CL0123