Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0432 ATGCAATACCACAGGCACACTCCTCCTCACATGGCCTCCTCCTCCACCCTCTTGTCTTCTAACCCCAGGGTTTTCTCTTCCACCATCTCCGATTATCATCATCATCATCATTATTGCTGTCCTCTCTCTCAACCTCCCACCATTCCCAAATCCTTCAGTGGCCTCTGCAAACCTTTCCATTCTCGAGTTCCCACTTCGATTCGCCGTCGAGGCTTCTTCGTCAAGGCTACGGTTATAAAGTGGCGATGTCCAAAGCAAATTCTCCCTCCCAACTGTGACACTGATTTCCAGAAAAAAGTCCTATATCTAGAGTCTATTGGTATTGACTCTTTCTCACTTATTGAAAATCATCCAAGCATCATCTCTGCCTCCTCTCTTCCTGAAATAAAATCCACTGTGGAATTCTTGACATCCATGGACTTCTCTGCAATTGAGTTCCGGCGCATTGCTGGAATGTGCCCAGAGATTCTCACATCCAGAGTATCAGATATTTTACCTGTCATCACCTTCCTGATCCGTGAAGCTCATGTGAATGGGTCGGATATCAAGCGCGTCATAAATCGTCGTCCCAGATTGCTTGTCTGCAGTGTTACTGAGCAACTTCGCCCCACCCTGTACTTTCTCCAGACCATTGGCATTGCAGAAGTAAACAGGCACACCTACTTGCTATCATGCAGTGTTGAAGAAAAGCTTATTACCAGGATCGATTACTTTGAGAATATCGGGTTTTCTCGGCGTGACGCGACTTCAATGTTTCGAAGGTTTCCTCAGCTGTTTAACTATAGTATTAAGAACAATTTGGAGCCTAAATACAAGTACTTTGTGGTGGAAATGGGGAGAGATTTGAAGGAGCTGAAAGAATTCCCCCAGTATTTCTCATTTAGCTTAGAGGGTAGAATCGGACCTAGGCATAAACATTGTGTAGAAATGGGTGTTTGTTTTCCTCTCCCTGTATTATTAAAGACAAATGAAGCGCAATTTCGTAATAGATTAGATGTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTCTATGGTGTTCAAATTGTGAAGTTGATTCAATATAG 1071 0.4332 MQYHRHTPPHMASSSTLLSSNPRVFSSTISDYHHHHHYCCPLSQPPTIPKSFSGLCKPFHSRVPTSIRRRGFFVKATVIKWRCPKQILPPNCDTDFQKKVLYLESIGIDSFSLIENHPSIISASSLPEIKSTVEFLTSMDFSAIEFRRIAGMCPEILTSRVSDILPVITFLIREAHVNGSDIKRVINRRPRLLVCSVTEQLRPTLYFLQTIGIAEVNRHTYLLSCSVEEKLITRIDYFENIGFSRRDATSMFRRFPQLFNYSIKNNLEPKYKYFVVEMGRDLKELKEFPQYFSFSLEGRIGPRHKHCVEMGVCFPLPVLLKTNEAQFRNRLDVCVNSSTPLKTSPLWCSNCEVDSI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0432 356 Gene3D Transcription termination factor 3, mitochondrial 111 335 IPR038538 -
Lele10g0432 356 SMART mt_12 215 244 IPR003690 GO:0003690|GO:0006355
Lele10g0432 356 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Lele10g0432 356 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Lele10g0432 356 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Lele10g0432 356 SMART mt_12 249 281 IPR003690 GO:0003690|GO:0006355
Lele10g0432 356 SMART mt_12 183 214 IPR003690 GO:0003690|GO:0006355
Lele10g0432 356 FunFam Transcription termination factor MTEF1, chloroplastic 171 335 - -
Lele10g0432 356 Pfam mTERF 81 177 IPR003690 GO:0003690|GO:0006355
Lele10g0432 356 Pfam mTERF 175 327 IPR003690 GO:0003690|GO:0006355
Lele10g0432 356 PANTHER CGI-12 PROTEIN-RELATED 102 332 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0432 Lele-ChrLele10 3034027 3036187 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele10g0432 mTERF 1.5e-30 No_clan