Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0427 ATGATTCGTCTTCTATCAACAGCCTCACGTCGTTTTCAGCCTTTCTCTAGAGGCATTGCTGCAAAACCTTCGCAAGCATTCACTCCCGCCACCTGTTCGACTAAATGTCTAGCTCAAGTCAAAGACGCAGAGGGAGACACTTCAGCTCAATCAACAGATTGTGTTCAAGTTTTCAGGGAATGTGGTTGTAATAATGATGATTTGGCCAGAATTTTTAAACGTAACCCACAATTGCGCAAAGCTGATGTTACCCTGCTTCAATCGAATCTCTCTGTTCTTAGTCGCTTGGGGCTAAAAGCACCTGACTTGGTAAGGATCATCAATTGTAGGCCTAGGTTTCTTCTTACTAGACGGGTTCATCGTTCTTTTGATGAGAGGTTTGCATATCTTGATTCCTTGTTTAAGTCGAAGGAATTGCTTAAGAGAGCTGTCGTGACCAACCCTACCCTCCTAATCTATGATTTTAACAACACCATTAAACCTGCTCTTGCACAATATCAAGAATTGGGTGTAAAGAAAGAAGATTTTCTTGCCTTGATCTGTACCCGGCCCACAATTATTCCAAGGACTTCATTTGATGAGGAGAAGCTGGAATATATACGCAAGACTGGGCTTTCCCAGAATTCAAAGTTGTATAAATATGTGGTTGCAATAATCGGGGTCTCTCGTGTGGAAACAATTCGTGAGAAGTTAGCAAATTTTGCCAGCTTTGGGTTCTCTGATGATGAGATATTTTATCTTATTGGGCGGTCTCCTCTTGTCATGACACTATCAATCGAAAAGGTTCAGAGGAATATGACGTTCATATTGACCACAATGAAGTTTGATGCTAGAACAGTTCTTGAAATGCCACGTCTCCTGTTTATAAACCTGGATACATTGTTGAAGCCTCGAGTTCTCCTAATAAGGAAGTTACAGGACATGGATGTTGAGTTAGAATTCACACAACGTTTAATAATTCGTGCTATGAGAATGAACGAGAATAGGTTTGTACATGTGTTCATTGAAAACCAGCCTAAGGAAGTTGCCAATGAATTAATGGAGTTCTATACGAAAGCAAAAGAATTTAAGAGATTAGCAGGGTTAAGAAAGAGGTGTGTTCAAAAAGGCTTTCCATATTGA 1122 0.4029 MIRLLSTASRRFQPFSRGIAAKPSQAFTPATCSTKCLAQVKDAEGDTSAQSTDCVQVFRECGCNNDDLARIFKRNPQLRKADVTLLQSNLSVLSRLGLKAPDLVRIINCRPRFLLTRRVHRSFDERFAYLDSLFKSKELLKRAVVTNPTLLIYDFNNTIKPALAQYQELGVKKEDFLALICTRPTIIPRTSFDEEKLEYIRKTGLSQNSKLYKYVVAIIGVSRVETIREKLANFASFGFSDDEIFYLIGRSPLVMTLSIEKVQRNMTFILTTMKFDARTVLEMPRLLFINLDTLLKPRVLLIRKLQDMDVELEFTQRLIIRAMRMNENRFVHVFIENQPKEVANELMEFYTKAKEFKRLAGLRKRCVQKGFPY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0427 373 Pfam mTERF 56 135 IPR003690 GO:0003690|GO:0006355
Lele10g0427 373 Pfam mTERF 116 330 IPR003690 GO:0003690|GO:0006355
Lele10g0427 373 Gene3D Transcription termination factor 3, mitochondrial 112 344 IPR038538 -
Lele10g0427 373 PANTHER CGI-12 PROTEIN-RELATED 34 337 IPR003690 GO:0003690|GO:0006355
Lele10g0427 373 FunFam Mitochondrial transcription termination factor family protein 123 344 - -
Lele10g0427 373 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Lele10g0427 373 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Lele10g0427 373 SMART mt_12 277 311 IPR003690 GO:0003690|GO:0006355
Lele10g0427 373 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Lele10g0427 373 SMART mt_12 209 240 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0427 Lele-ChrLele10 3005374 3006495 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele10g0427 mTERF 1.5e-29 No_clan