Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0422 ATGGACCCTAGATATGATGGCTTCCAGCCTGTGCCACAGTCTGTAATGCAGGACCATCTGGATGGTGTGCATACTAGTAGGGGATCATATGCCCCTAATACATCTGAAGTTAGAGCTGTACTTAATTATTCCATACAGACTGGTGAGGAGTTTTCACTTGAATTTATGCGTGATAGGGTGAATCTTAGGAAGCCTATAATTCCCAATGTTGGTGATCCCAATTCTGCAGCAGGTAGAAGTGCAGGATGTGAAAATGGATCAGATATTTCTATGCGTGAAATGGCTGGCAGGGATCCAAAAGAGTATGATCGAAAGGATACATTGTTAGATGGAGGCAGATGCAATTATGCATCAATTCCAAGAGCTTCATATAATCAGGAAAATGGTCGATCTTTGCATGGGTATGCCTCTTATGGAAGTTATCATAGCTCATCAATGACAATGAAAGTCCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCTGGTGATGGGAAACTTAGATATGTTGGAGGTGAAACACGCATTATCCGAATAAGAAAGGACATATCTTGGCAGGAGCTTATGCAGAAATCATTGTCAATATATAATCAAACTCATGTAATTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTCTCTGTGTCATCTGATGAAGATCTGCAGAATATGATGGAGGAATGTAATCACCCACAAGATAGAGAAGGATCACAAAAGCTTAGAATTTTTCTATTCTCAGTGAGTGATTTGGATGATGCCCATTTTGGTCTCAGTAGTGTGGGTGATGATACCGAGGTCCAATTTGTTGTTGCTGTTAATGGCATCTTTGGTTCAAGAAACAACTCAGTGCTCCTTGGTGCGAGCTCTTCAGCAAATGATATGCATGAATTGGACAGGCAAAATGCTGAGACGGAAGTTGGGAAAGTTCCTGTAGAATCTATTTGTATCAGCAACGCTCCATTGACTGGGAATGATGACCCATCATCGACCACTCAGTCTTCAAAACCAATGCTTCCAACTTCCTCAAATGCTTATGAAACCTATCCACGCTACAGAGACCAGATGATGCACCTTGGGGAGGCTTTTAGTCAATATCCTATTCACTATGGCCTTAATCCTTCTCAAAACTTTACTCTCGTAGAGACTTCTAATGCTATGCCTCCTCATGGGATGATAAATCAACAAGGGATTTTGAATGAAGGTTCTTCTCCTAATGGATTACAAGTGCAGAATTTGGAAATACCAGCAATGCTGGTGAAAAAAATGGGTGATAGTTCAGTTCAACAAGGAAGTAACCCTGCAAAAGTTCTATCCTCGGAAACACCATCCCCTGTTCCCACACAACCAAAACATGATTTCTTGAAAAATAATGTTAATAAAGCTACAGTTGCAGTTAACATACCTGAGGAGAAACTACCCACGCTGCCATCAATGAAAATGGAGCAGCAACGGGAGTATAAAGAGGCCTCTCCTACATCTAGCAGTGCATTTGGTCCTGGTAATGTTGATTTTCAATCCAGTGGGATTGATTTAAGTTGCCTTCACCCTCCTCCAATGCCTAAAAGAGTTTACTATTCTTATTCTGAAAGAACTCCTAGGGAGCAAGTAGAATTGCTGAATCGTTCTGCAAAGTCAGATGACACGTATGATTCTCAGTTTCCTGTATCAGATTTACTTTCTGACATCAATCCCCTGTATTCGGTCACAGAATCTGGTGATAACTTGCACAATAGAAATCAGTCTAATTTAACAGAGGATTCAAGTGCCACATCAAAACCACTGTATGTGGATGGCAACATCATTGTTAATGGGCTTAATGAACTACAGATGCACAAACTGTCGCCTGAGACGAGCAATCAGATGAAGTCAAAACTCTCAGACCATTTGGATGTGGAGTTGAAGCCGGTATTACCAAGCAATGAAGGAAGTAAAGTTGTGGTAAATGAGGATCAGGTCATCAGGTCCGATACTGATAGTTATTTTGAAGATAACTACAGCAAACCCCTGGGTGATGAAAACAAAAACCTCAAATCAGATTTTCCTGCTTTGGATCAGGTTCCCACTTTTAAGCACAATGATGGCCCAACATCTCATCTTCCAGAGATTAATTGGGGTCATGGCTCAGGAAAAGAATCAAATAATGATTGTAATGTGCAAGAAGTACCTGTTTCTTTTACTGGTAACACAACTGAAAACATTTCGCAAGATTTTACATTAAATGCTCTTCCCAAACAAGAACAAGCTGACATTCTTATTGATATTGATGATCGATTTCCTCGTGAACTGCTCTCTGATATGTATACTAAAGCAATACTTGCGGAAGACCCATCCACTCTACATCCATTAACTAATATTGGAGTGGGCATAAGCATAAACATGGAAAACCATGAACCCAAGTCATGGTCATATTTTGGGAAATTGGCACAAGAAGGGCTAGATAACCTCTCTCTTATTGACCGGGATCCTCTTGGTTTTTCACCTGAATCTGGAAATGTAGATGATAGAACTCACCTTGTCACGCCGCTAACACCTGATGAAATATCTGTAAACCAAGCAGATTTGCATCTCAATTTTGATGGAGAAAGCCAGAAGGGTTTTCATGGAATAATTGGAACAGAAACCACTTTTGTGCAGTCTAATTATGATTATTCCCAAGTGAAGGAGACCAAAAGTATGCAGTTTGATGGTACAGTGGAGAATTCAAGGGGTCAAGAATCAGAATTTGAGGATGGGAAATTTGAAACAAGAAATAGCGGTCTACCTCCACTTGATCCTTCTCTGGAAGGTTTTGATATCAATTCCTTACAGGTCATAAAGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCTGGGACCTTTGGAACTGTGTATCACGGAAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGACTGTAGAATTTTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCGAATGTTCTGGCATTTTATGGTGTAGTCCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCTATGGATGCAGCTTTTGGGATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAGTGTGACAATTTGCTTGTGAACTTGAAAGACCCTGTGAGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGGAATACATTGGTTTCTGGTGGTGTGCGGGGAACCCTACCTTGGATGGCTCCAGAGCTGCTGAATGGCAGCAGCAACAAAGTCTCTGAAAAGGTTGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGGGAGGAGCCATATGCCAATATGCACTATGGGGCAATCATAGGTGGGATTGTAAATAACACATTAAGGCCCACAATACCAAGTTCTTGTGATGCTGAATGGAGGACACTAATGGATCAATGTTGGGCACCCAACCCTGCAGCGAGGCCTTCATTCACAGAAATTGCCAGTCGCTTAAGGGTTATGTCTGCTTCTGCTTCCCAAACCAAATCACAGCCTAACAAGCCTGCCAAATGA 3684 0.4131 MDPRYDGFQPVPQSVMQDHLDGVHTSRGSYAPNTSEVRAVLNYSIQTGEEFSLEFMRDRVNLRKPIIPNVGDPNSAAGRSAGCENGSDISMREMAGRDPKEYDRKDTLLDGGRCNYASIPRASYNQENGRSLHGYASYGSYHSSSMTMKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRKDISWQELMQKSLSIYNQTHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNHPQDREGSQKLRIFLFSVSDLDDAHFGLSSVGDDTEVQFVVAVNGIFGSRNNSVLLGASSSANDMHELDRQNAETEVGKVPVESICISNAPLTGNDDPSSTTQSSKPMLPTSSNAYETYPRYRDQMMHLGEAFSQYPIHYGLNPSQNFTLVETSNAMPPHGMINQQGILNEGSSPNGLQVQNLEIPAMLVKKMGDSSVQQGSNPAKVLSSETPSPVPTQPKHDFLKNNVNKATVAVNIPEEKLPTLPSMKMEQQREYKEASPTSSSAFGPGNVDFQSSGIDLSCLHPPPMPKRVYYSYSERTPREQVELLNRSAKSDDTYDSQFPVSDLLSDINPLYSVTESGDNLHNRNQSNLTEDSSATSKPLYVDGNIIVNGLNELQMHKLSPETSNQMKSKLSDHLDVELKPVLPSNEGSKVVVNEDQVIRSDTDSYFEDNYSKPLGDENKNLKSDFPALDQVPTFKHNDGPTSHLPEINWGHGSGKESNNDCNVQEVPVSFTGNTTENISQDFTLNALPKQEQADILIDIDDRFPRELLSDMYTKAILAEDPSTLHPLTNIGVGISINMENHEPKSWSYFGKLAQEGLDNLSLIDRDPLGFSPESGNVDDRTHLVTPLTPDEISVNQADLHLNFDGESQKGFHGIIGTETTFVQSNYDYSQVKETKSMQFDGTVENSRGQESEFEDGKFETRNSGLPPLDPSLEGFDINSLQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSSCDAEWRTLMDQCWAPNPAARPSFTEIASRLRVMSASASQTKSQPNKPAK 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0422 1227 CDD STKc_MAP3K-like 951 1208 - -
Lele10g0422 1227 CDD PB1_UP2 151 247 - -
Lele10g0422 1227 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 167 249 - -
Lele10g0422 1227 Gene3D Phosphorylase Kinase; domain 1 938 1032 - -
Lele10g0422 1227 MobiDBLite consensus disorder prediction 319 346 - -
Lele10g0422 1227 SMART PB1_new 162 249 IPR000270 GO:0005515
Lele10g0422 1227 PRINTS Tyrosine kinase catalytic domain signature 1027 1040 IPR001245 GO:0004672|GO:0006468
Lele10g0422 1227 PRINTS Tyrosine kinase catalytic domain signature 1179 1201 IPR001245 GO:0004672|GO:0006468
Lele10g0422 1227 PRINTS Tyrosine kinase catalytic domain signature 1064 1082 IPR001245 GO:0004672|GO:0006468
Lele10g0422 1227 PRINTS Tyrosine kinase catalytic domain signature 1135 1157 IPR001245 GO:0004672|GO:0006468
Lele10g0422 1227 MobiDBLite consensus disorder prediction 489 503 - -
Lele10g0422 1227 ProSiteProfiles Protein kinase domain profile. 945 1210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0422 1227 SUPERFAMILY Protein kinase-like (PK-like) 935 1207 IPR011009 -
Lele10g0422 1227 MobiDBLite consensus disorder prediction 572 592 - -
Lele10g0422 1227 Pfam PB1 domain 164 248 IPR000270 GO:0005515
Lele10g0422 1227 MobiDBLite consensus disorder prediction 899 923 - -
Lele10g0422 1227 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1033 1225 - -
Lele10g0422 1227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1070 1082 IPR008271 GO:0004672|GO:0006468
Lele10g0422 1227 Gene3D Transferase(Phosphotransferase) domain 1 1033 1227 - -
Lele10g0422 1227 ProSitePatterns Protein kinases ATP-binding region signature. 951 976 IPR017441 GO:0005524
Lele10g0422 1227 MobiDBLite consensus disorder prediction 71 91 - -
Lele10g0422 1227 SUPERFAMILY CAD & PB1 domains 164 252 - -
Lele10g0422 1227 SMART serkin_6 945 1211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0422 1227 MobiDBLite consensus disorder prediction 426 457 - -
Lele10g0422 1227 Gene3D - 166 249 - -
Lele10g0422 1227 Pfam Protein tyrosine and serine/threonine kinase 946 1208 IPR001245 GO:0004672|GO:0006468
Lele10g0422 1227 PANTHER SERINE-THREONINE PROTEIN KINASE 189 1209 - -
Lele10g0422 1227 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 938 1032 - -
Lele10g0422 1227 MobiDBLite consensus disorder prediction 475 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0422 Lele-ChrLele10 2970238 2977216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0422 11 558 MAP Kinase Kinase Kinase AT1G16270 40.193 9.46e-86 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele10g0422 PK_Tyr_Ser-Thr 4.2e-62 CL0016