Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0421 ATGATGGAACAACTTGGAATGCAGAAACAGCAACAGTACAATACCATGGAACCTACAAATGAGGAAATCCATTCTGCACCACAGTCTACCGTGCAGGACCGTCTGGAAGGCATGCGTATCAATATGAGGCCTGCAGACCGTAATATGTCAGATAAAAAACCTGTACTTAATTACTCCATTCAGACTGGTGAGGAATTTTCTCTTGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATCATGGGTGATCCCAATTATGCAACGGGTTATATGGAATTGAAGGGTATTTTAGGCATTAGTCATTCAGGATCTGAAAGTGGCTCAGATATTTCTATGCTTCCAAAAGTTGAAAAAGGTCCCAAAGAATATGACAGAAGGAGCTCTTCTTTGCAACAGGACAGAAGCAATTATGGGTCAGTTCGATCAATCCCAATAACTTCATCTAATCAAGATAATAACCGAGTCCTTCATGGTATTGCTTCTTCTGGAGCTTCTACTGGCTCATCCAAGAAGATGAAGGTTCTTTGTAGTTTTGGTGGTAAAATACTGCCACGCCCCAGTGATGGAAAGCTTAGATATGTTGGAGGTGAAACGCGTATTATTTCCATCAGAAAGGACATAAGTTGGCAGGAGCTTATGCAGAAAGCCTTATCACTCTATAATGAAACTCATGCTATAAAGTATCAACTCCCTGGGGAAGATCTTGATGCCTTGGTTTCTGTATCTAGTGATGAGGATCTGCGAAATATGATGGAGGAATGTCATGATCTAGAAAACAGAGAAGGATCACAAAAACTTAGGATGTTTCTGTTTTCCGTGATTGATATGGATGATCCTAGTGTTGATGGTGATACGGAAATCCAGTATGTAGTGGCAGTTAATGGCATGGACTTGGGATCAAGGAACCATTCAATTCTTCACGTTGCAAGCGCTTCTGCTGATAATTTACATGAACTAGATGGGCAGAATGTTGAAAGGGAGGCCGGTAGAACTCAGATAGAATCAACTGGAGGCCCTAGTTCTTCCTTGACTGCCAATGGTAACTTATCATGGGGAATTCAGTATTCGCAACCAATGATTCCAACTGCCTCAAGTGCTTATGAAAGCAATCTGTTGTTTCATAGTAGCCATCATGGGGAAACCAGTCAATATCCAGTGCACTATGGTGTTGATTCTTTGAACAACTCAGGTTTTAGACCGATTCCAGTTTCTGTGCCTCCACATGTTCCTAACATTCAAGGAATTATCAATGAAGGGCATCAACCTGATGTGTTGCGGGTACAAAATCCAGAAATTCCAGCAATGAAGGTAAAAAAAAGGGGTGATAGTTCCATTAAGCATGAAAGTGACTCTGGAAAAGGCTTATCCTCAGAAACACCATATCCTGTTCCTCCACAACCATTTGATGGAAATTTACCGGGTAACTTTTCTGAAGTATCAGTTACTAATGCTGTACCAGGGATGCACCTGCCTAAAGTTCCTTCTAAAAGCAAGGTCAAGCACCAACATTATGAGGAGGCCTCTTCATTGGCTAATGCGGAGAATTCTACACAGATTCCGAAGTCTGATGAAGATGACTTCTATTCCACCTCTACTAATTCTTTCAATCCTTCTTATGTTGATGCTGGATCCAATGTTATTGATTTGAGTTGCCTCGAGCCACCTGCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCTAGAGAGCAGGCAGATTTGCTGAACCGATCCACAAAGTCAGATGATGCACATGGTTCTCATGTTCTCATGTCTGATTTACTCTCTGACTTCAACCAACAGAATTCAACTACAGAATCAAGTGATAATTTTCAGGTTGAAGATCTGTCAAATTGGAGTGCAGTGTCAAGCACAAAACCATTGAATACAAATGTCCATGCCATTGGCAATGGGCTTGCCAAGCTGCAAAATCATAAACAGTTTCCAGATGCAAACAACACAGATAATAAAGTTGCTGCAAATGAGGATTGGATCCTTAGATCTGAGAGTGAAACCAACTTATCCAAAGATAACCATAACAATCGCCCAGTTGATGAAACCAACAGCACTGAACATCCTGCATTTCACAAGGTTCCATCTGACCGTAATTTCGTTGATGCTTCTGGCAAAGAATACAGTAATGATGCTAAGGTTCAACCACAGCCCGTTTCTTTAACTGGGAACATGAGCCAAGATGTTTCTCAAGGTTTACCCTCAGATGCTGTTTCCACGCCTTCTCAAGGTGATATTATGATTGATATTGAGGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAAGGCAATAATCTCTGAAGATTCCTCACATATTAGTCCGTTGCCAACAGATGGAACAGGCTTGAGCTTAAATGTGAAAAATCATGAGCCAAAACATTGGTCATATTTTCAGAAGTTGGCAAATGAAGGGTCTGATAATTTGTCTCTAATTGATCAAGATCATCTAGGGTTTTCATCTACATTAAGAAAAGCACAAGAAGGTGATAGTAGATCTCAGCAAGTTGCACCCCTGCCAGCTGATGGATTTTCAGTAGGTCGCGATTTTGGTAAAGAAAATCAGAAAAATTTGCCTGTAACAACTAGAACAGAGGCGACTGTTCCGCAAACAAACTATGATCAAACCCAAGTTATTGAGACTGAAAACAAGAATTTGGATCCAGTAAAGGGAAACACAAGAGTAAAAGACTCTGGATATGAGGATGGTAAGAATGAAGCAGGGAATATTGGTCATCTGCATGATCGTTCTGTGGATGATATTGACATCAGTACTTTGCAGCTCATAAATAATGAAGATCTTGAAGAGCTGAAAGAATTGGGTTCAGGAACCTTTGGGACTGTATACCATGGAAAATGGAGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTAGATCTTCAGAACAAGAGAGACTGACTGTAGAGTTTTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCACCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGACGGGCCCGGAGGAACATTAGCCACTGTTACAGAGTTCATGGTAGATGGTTCTCTGAGGCATGTTTTGCTTCGTAAGGATAGGTATTTAGATCGCCGCAAGAGGCTGATAATCTCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGATTTGAAATGTGACAATTTGCTTGTGAACTTAAAGGATTCTTTACGACCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGAAATACCCTGGTTTCTGGTGGTGTGCGGGGAACCCTACCTTGGATGGCACCTGAGCTTTTGAATGGCAGCAGCAATAAAGTCTCAGAGAAGGTTGATGTGTTCTCGTTTGGCATCGTATTATGGGAGATTCTTACTGGTGAAGAACCATATGCTAATATGCACTATGGTGCAATTATAGGAGGCATTGTAAATAACACATTAAGGCCAACAATCCCAAGTTATTGTGATGCTGAGTGGCGGAAACTAATGGAGCAGTGTTGGGCACCTAACCCTGCAGCCAGGCCATCATTCACAGAAATTGCCCGCCGCTTAAGGGTGATGTCAGCAGCTGCTAGTCAGACCAAAGGGCAAGGCTATAAGGCATCCAAATGA 3684 0.4148 MMEQLGMQKQQQYNTMEPTNEEIHSAPQSTVQDRLEGMRINMRPADRNMSDKKPVLNYSIQTGEEFSLEFMRDRVNLRQPVFPNIMGDPNYATGYMELKGILGISHSGSESGSDISMLPKVEKGPKEYDRRSSSLQQDRSNYGSVRSIPITSSNQDNNRVLHGIASSGASTGSSKKMKVLCSFGGKILPRPSDGKLRYVGGETRIISIRKDISWQELMQKALSLYNETHAIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLENREGSQKLRMFLFSVIDMDDPSVDGDTEIQYVVAVNGMDLGSRNHSILHVASASADNLHELDGQNVEREAGRTQIESTGGPSSSLTANGNLSWGIQYSQPMIPTASSAYESNLLFHSSHHGETSQYPVHYGVDSLNNSGFRPIPVSVPPHVPNIQGIINEGHQPDVLRVQNPEIPAMKVKKRGDSSIKHESDSGKGLSSETPYPVPPQPFDGNLPGNFSEVSVTNAVPGMHLPKVPSKSKVKHQHYEEASSLANAENSTQIPKSDEDDFYSTSTNSFNPSYVDAGSNVIDLSCLEPPALPNRVYYSERIPREQADLLNRSTKSDDAHGSHVLMSDLLSDFNQQNSTTESSDNFQVEDLSNWSAVSSTKPLNTNVHAIGNGLAKLQNHKQFPDANNTDNKVAANEDWILRSESETNLSKDNHNNRPVDETNSTEHPAFHKVPSDRNFVDASGKEYSNDAKVQPQPVSLTGNMSQDVSQGLPSDAVSTPSQGDIMIDIEDRFPRDFLYDMFSKAIISEDSSHISPLPTDGTGLSLNVKNHEPKHWSYFQKLANEGSDNLSLIDQDHLGFSSTLRKAQEGDSRSQQVAPLPADGFSVGRDFGKENQKNLPVTTRTEATVPQTNYDQTQVIETENKNLDPVKGNTRVKDSGYEDGKNEAGNIGHLHDRSVDDIDISTLQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIISMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDSLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDAEWRKLMEQCWAPNPAARPSFTEIARRLRVMSAAASQTKGQGYKASK 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0421 1227 SMART PB1_new 191 278 IPR000270 GO:0005515
Lele10g0421 1227 CDD STKc_MAP3K-like 951 1208 - -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 675 706 - -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 835 865 - -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 120 134 - -
Lele10g0421 1227 PRINTS Tyrosine kinase catalytic domain signature 1179 1201 IPR001245 GO:0004672|GO:0006468
Lele10g0421 1227 PRINTS Tyrosine kinase catalytic domain signature 1027 1040 IPR001245 GO:0004672|GO:0006468
Lele10g0421 1227 PRINTS Tyrosine kinase catalytic domain signature 1064 1082 IPR001245 GO:0004672|GO:0006468
Lele10g0421 1227 PRINTS Tyrosine kinase catalytic domain signature 1135 1157 IPR001245 GO:0004672|GO:0006468
Lele10g0421 1227 MobiDBLite consensus disorder prediction 513 535 - -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 898 919 - -
Lele10g0421 1227 SUPERFAMILY CAD & PB1 domains 192 277 - -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 439 458 - -
Lele10g0421 1227 Gene3D - 195 277 - -
Lele10g0421 1227 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 938 1032 - -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 675 704 - -
Lele10g0421 1227 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 196 278 - -
Lele10g0421 1227 Pfam Protein tyrosine and serine/threonine kinase 946 1208 IPR001245 GO:0004672|GO:0006468
Lele10g0421 1227 SMART serkin_6 945 1211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0421 1227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1070 1082 IPR008271 GO:0004672|GO:0006468
Lele10g0421 1227 Gene3D Phosphorylase Kinase; domain 1 938 1032 - -
Lele10g0421 1227 ProSitePatterns Protein kinases ATP-binding region signature. 951 976 IPR017441 GO:0005524
Lele10g0421 1227 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1033 1225 - -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 499 535 - -
Lele10g0421 1227 Pfam PB1 domain 193 277 IPR000270 GO:0005515
Lele10g0421 1227 Gene3D Transferase(Phosphotransferase) domain 1 1033 1226 - -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 108 159 - -
Lele10g0421 1227 CDD PB1_UP2 180 276 - -
Lele10g0421 1227 ProSiteProfiles Protein kinase domain profile. 945 1210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0421 1227 MobiDBLite consensus disorder prediction 439 470 - -
Lele10g0421 1227 PANTHER SERINE-THREONINE PROTEIN KINASE 221 1209 - -
Lele10g0421 1227 SUPERFAMILY Protein kinase-like (PK-like) 937 1207 IPR011009 -
Lele10g0421 1227 MobiDBLite consensus disorder prediction 135 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0421 Lele-ChrLele10 2961305 2967153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0421 12 1227 MAP Kinase Kinase Kinase AT1G16270 47.537 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele10g0421 PK_Tyr_Ser-Thr 1.5e-62 CL0016