Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0412 ATGAAGAGCTCAAAAGCCAGTGCGCATGCAAGAAGGAGTGCTTTGGTAGCTAACAAAGGGATTATCTTGAATACTGCCAGTTATTCAAAGGGTGGATTAAAAAATATGAAGAAAAGCAGTGGCATATACGGCAGTTCTGCAAATATGAAAGCGAGAAAGGCATTGGCTGATGTTAGCAACGTTCAGGGCAACTCTGCGAGGAATATTAAACAGGATGCTTTAAAAATGAAGGTTTTAGCCAGTACAGGCACCAAGTTAGGCTATGCCTCTTCAAGGAGATCCTTTACGGGGAGACTGCAAAGGAATATAAGTCAAGTTGAAGGTCAGTTAGATGCTTACAAGAGAGTAGGCACTAGTTCAATAGCACCCTTAGGTGCTCAGAAGACTAATAAAAATGTAGGAAGATCATCTGTTGCCACAGAGGGCAGGACTGCAAAAAACTCTCTCTTACCTACAGTGACAAGGAGGTCTTTACCTGTGCCAAGGAGAGTCAATAGGGAAGACATGAGCAACAGAAAGGTTGTTACAGGTAATGCTAGGAGTTCTGATACAACAGAAAAAATAAGAAGAATACCAACTAAGGCGGAAACGGTGAGAAAAGTTGGCCCCAAATCATCAAGTGCGAGAAGCCACCTATGGAAGACTCGAGCGAGTGATGGCCATGTTCATATTAATGTGGGAGCTATGGTTAAAACCAATGTTTTACAAGCGTCCTCAAGGAAGTCCATCAAGCCTCTTGTTAAGACCACACTTAAGGCTTCTAACGCTCCAAGGACTTCAAACTCTAAGTCCAGAACAAATTTACCTGTGGCTGCTGCGATTTCATCACAGGATGAGGAAGCAGTTGCTTTATCTCTCCCTGAGAATAATTTACCTGTGGCTTCGAATGATGCAAATGAAAAGCATCTTCCATCTATTGGAGACAGCAACCCCAGAACAAATTCTTTAGAGATAATTGGAAGGAAAAAGTCCAGCCATCGGAAATCTTATACATCTTTGTTACTGGAACGAACTAAGCTTCTCAAGGAAAGGGGGGAAATAACTGAGCAGGATAACCTACCAAATATCGATGATGAGTGCAATCAACTAGAAGTTTCTGAATATATTGATGAAATATATCGGTACTATTGGGTCACTGAGGTTCAAACTTCGGCTCGGGCAAATTACATGTCAATTCAGACAGACATTACACCTCATATGCGGGGCATATTGATAAACTGGTTAATTGAAGTACACTTGAAATTTGAGTTGATGCCAGAAACCCTGTATCTCACAGTTTCATTACTGGATCAATATCTATCTCTAGTAACAATTAAAAAGAATGAATTGCAGTTAGTTGGTCTTACTGCACTTTTGCTGGCCTCAAAATATGAGGACTTTTGGCATCCTAGGGTCAAAGATTTGATAAGCATTTCAATTGAATCGTATACAAGAGAACAAATGCTTGGAATGGAGAAGCTTATTCTCAGAAACTTGAAGTTCCGTCTTAACGGTCCCACTCCTTATGTTTTCATGGTGAGGTTTCTGAAGGCTGCTCAGTCAAACAAGAAGCTGGAACATTTGGCATTCTTTCTGATTGAACTGTGCTTAGTTGAATATGAAGCCTTGGCTTTCAAGTCTTCACTGCTATGTGCATCCGCAATCTATGTTGCTCGTTGCACCCTGCAAATTACGCCACCTTGGACTCCATTGCTTCATAGGCATGCTCGTTATGAAGTTTCCCAATTAAGGCATGGTTCTTATAGTCTCTTGGACCCTACTTAG 1764 0.4127 MKSSKASAHARRSALVANKGIILNTASYSKGGLKNMKKSSGIYGSSANMKARKALADVSNVQGNSARNIKQDALKMKVLASTGTKLGYASSRRSFTGRLQRNISQVEGQLDAYKRVGTSSIAPLGAQKTNKNVGRSSVATEGRTAKNSLLPTVTRRSLPVPRRVNREDMSNRKVVTGNARSSDTTEKIRRIPTKAETVRKVGPKSSSARSHLWKTRASDGHVHINVGAMVKTNVLQASSRKSIKPLVKTTLKASNAPRTSNSKSRTNLPVAAAISSQDEEAVALSLPENNLPVASNDANEKHLPSIGDSNPRTNSLEIIGRKKSSHRKSYTSLLLERTKLLKERGEITEQDNLPNIDDECNQLEVSEYIDEIYRYYWVTEVQTSARANYMSIQTDITPHMRGILINWLIEVHLKFELMPETLYLTVSLLDQYLSLVTIKKNELQLVGLTALLLASKYEDFWHPRVKDLISISIESYTREQMLGMEKLILRNLKFRLNGPTPYVFMVRFLKAAQSNKKLEHLAFFLIELCLVEYEALAFKSSLLCASAIYVARCTLQITPPWTPLLHRHARYEVSQLRHGSYSLLDPT 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0412 587 CDD CYCLIN 400 489 IPR013763 -
Lele10g0412 587 Gene3D - 371 578 - -
Lele10g0412 587 Pfam Cyclin, N-terminal domain 371 497 IPR006671 -
Lele10g0412 587 Pfam Cyclin, C-terminal domain 499 577 IPR004367 -
Lele10g0412 587 SMART cyclin_7 503 585 IPR013763 -
Lele10g0412 587 SMART cyclin_7 406 490 IPR013763 -
Lele10g0412 587 FunFam Cyclin N-terminal domain containing 2 386 497 - -
Lele10g0412 587 Gene3D - 385 497 - -
Lele10g0412 587 CDD CYCLIN 499 571 IPR013763 -
Lele10g0412 587 PIRSF Cyclin_A_B_D_E 18 91 IPR039361 -
Lele10g0412 587 PIRSF Cyclin_A_B_D_E 169 586 IPR039361 -
Lele10g0412 587 PIRSF Cyclin_A_B_D_E 88 284 IPR039361 -
Lele10g0412 587 PANTHER CYCLINS 324 556 IPR039361 -
Lele10g0412 587 SMART Cyclin_C_2 499 587 IPR004367 -
Lele10g0412 587 SUPERFAMILY Cyclin-like 361 497 IPR036915 -
Lele10g0412 587 SUPERFAMILY Cyclin-like 499 582 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0412 Lele-ChrLele10 2897488 2902833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0412 52 584 Core Cell Cycle Gene Families AT1G16330 47.310 5.15e-147 437