Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0411 ATGACCATCAGCTTTCAACCTTCTTCTTCTTCTCCTTCTTCCTCCTCCTCCTCCTTCTTCAAATCTCTCTGCGTTTACACGTTCCTCCTCCTCATCATCTTCCCCAGTACTACTGTGGCTTCTTCTGGGGATGGCTGTTCCTGTGACCTCTCAAAAGCTAAGAACAGTGACGATGCAAGTGAAGCTCTGAGATACAAACTCGGCTCCATAGCTTCTGTTCTGATAGCCGGTGGTCTAGGCGTGAGCCTTCCATTTCTGAGCAAGAGGATCCCAGCTCTGAGACCTGAAAATGACATGTTCTTCATGGTGAAAGCTTTCGCCGCCGGAGTGATCCTAGCAACTGGGTTCGTTCACATACTTCCTGAAGCATTCCAGAGACTGAACTCGCCATGTTTAACAGACAAACCTTGGCACAAGTTTCCCTTCACTGGCTTCGTCGCCATGGTATCTTCTATAGGAACATTAATGGTGGATTCTATTGCAACTGGGTATTATAAAAGACAACATTTCGGCTCAAAACAATTTTCTCCTACAGACGAAGAGAAAGGAGACGATGACGAACATGCTGATCATATTCATGTTCACACTCATACGACGCACGGTCATGCTCATGGATCAGCACAAGAGGACTCAGAGTTAATCAGGCACAGAATCATATCACAAGTGTTGGAGATGGGAATAGTTGTGCATTCAGTGATAATTGGAATCTCTTTGGGTGCTACTGGCAGCATTGATGCTATAAAGACTCTTCTAGTGGCCCTCTCTTTCCATCAGTTCTTTGAAGGCATGGGCCTTGGTGGTTGTATTTCTCAGGCCAAGTTCAAGTCAAGAGCAACAGCAATAATGGCAACATTTTTCTCACTGACAACACCAATAGGGATGGGAATTTCAAGTGTGTATGAAGAGAACAGCCAAACTTCAGTGATAGTGGAAGGCATTTTCAGTTCTGCTTCAGCTGGAATCTTAATCTACATGGCTCTTGTTGATCTTCTTGCTGCTGATTTCATGAACCCTAAACTTCACAGCAATGTCAAGCTCCATCTTGGAGCTAACATCTCTCTCCTTCTTGGCTCTGCTTCCATGTCTCTCTTAGCTAAATGGGCTTGA 1107 0.4499 MTISFQPSSSSPSSSSSSFFKSLCVYTFLLLIIFPSTTVASSGDGCSCDLSKAKNSDDASEALRYKLGSIASVLIAGGLGVSLPFLSKRIPALRPENDMFFMVKAFAAGVILATGFVHILPEAFQRLNSPCLTDKPWHKFPFTGFVAMVSSIGTLMVDSIATGYYKRQHFGSKQFSPTDEEKGDDDEHADHIHVHTHTTHGHAHGSAQEDSELIRHRIISQVLEMGIVVHSVIIGISLGATGSIDAIKTLLVALSFHQFFEGMGLGGCISQAKFKSRATAIMATFFSLTTPIGMGISSVYEENSQTSVIVEGIFSSASAGILIYMALVDLLAADFMNPKLHSNVKLHLGANISLLLGSASMSLLAKWA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0411 368 Pfam ZIP Zinc transporter 65 365 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele10g0411 368 PANTHER ZINC/IRON TRANSPORTER 62 362 - -
Lele10g0411 368 TIGRFAM zip: ZIP zinc/iron transport family 48 368 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0411 Lele-ChrLele10 2890981 2893925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0411 55 368 Inorganic Solute Cotransporters AT3G12750 64.688 1.16e-149 425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0411 10 2890981 2893925 Lele10g0411 10 2890981 2893925 ECH
Lele10g0411 10 2890981 2893925 Lele11g0432 11 4300035 4303037 hybridization
Lele10g0411 10 2890981 2893925 Lele12g0869 12 16562598 16565555 hybridization