Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0410 ATGCTTGTTATAAAACCCCACCATTATGCAGAGAGATCGATGAGAGGATCATCAAAAGGGGCAAAACATGGGAGAATTCTGACACACGAGCACGCAAAGAAGTTGAGAATAATGGCTTTGAGGCATTTTGATTTTTCTTCTTTAGAATTTTCAAATGCACAGAGTGTTGACTCATCATCTCCTTTGCCACCTTATGAATCTCTAGCTCCTATTCCTTTACCACAAAATAGCCCACCGACGGGCCTTCAGTTACCACCACCAGGCCCAACTGGGTCTCTTCCCACACCAACCCCACAAAGTATCCCAAACTCACCTGGCATGAGTTCCCCATTACAAAATCCTCCAATTATTATCCCAGGCCCACCGGGCTCACCTGGGTCTATGACAAGTCCACCGACTTCTAACTCGCCCCCAAGTGTAGGAACTATGCCGGGCTCACCTGAACCGATGCAAAATCCTCCAATCGTTCTCCCAAGCCCATCCGGATCTACAATAAGTCCACCAAGTACTATCCCATCCCCAAGTGGAGGTACTGGGCCAGGCTCACCTGAACCGATACAAAATCCACCAGGGTCTACAATGAACCCACCAAGTACAATTTCTCCTCCAAGTGAAGGTACTGTTCCAGGTTCCCCGGAACCAATACAAAATCCTCCTATTATTCTTCCAGGCCCACCAGGGTCAACCACAATCCCACCAAATACAAACCCATCTCCTGGTGGTGGTGGCGGCGGAGGAGGAGGTGGTGGTGGTGTTCCTAGCCCAATAGTGTTTGAGCCTCCTGTAGTGTATCCGCCGCCTTCAGTGCCTCCTCCTCCTAGCCGCATGGCCCCAAGTGGAGCCATATGGTGTGTGGTTAAGCCATCAGTGCCAGACCCAATAATGCAAGAAGCCATGAACTATGCTTGTGGGTTAGGTGCAGATTGTGATCCCATTCGACCCAATGGGCCTTGCTTCGAGCCCGATACTGTTATTGCACATACTTCATTCGTCTTCAATAGTTTCTGGCAAAATTCCAAGGCCACTGGTGGCAACTGCGACTTTGGAGGCACTGGCATGCTTGTTTCAGAGGACCCAAGCTACGATGGATGTCACTTTGTCTACAGTTAG 1110 0.4964 MLVIKPHHYAERSMRGSSKGAKHGRILTHEHAKKLRIMALRHFDFSSLEFSNAQSVDSSSPLPPYESLAPIPLPQNSPPTGLQLPPPGPTGSLPTPTPQSIPNSPGMSSPLQNPPIIIPGPPGSPGSMTSPPTSNSPPSVGTMPGSPEPMQNPPIVLPSPSGSTISPPSTIPSPSGGTGPGSPEPIQNPPGSTMNPPSTISPPSEGTVPGSPEPIQNPPIILPGPPGSTTIPPNTNPSPGGGGGGGGGGGGVPSPIVFEPPVVYPPPSVPPPPSRMAPSGAIWCVVKPSVPDPIMQEAMNYACGLGADCDPIRPNGPCFEPDTVIAHTSFVFNSFWQNSKATGGNCDFGGTGMLVSEDPSYDGCHFVYS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0410 369 MobiDBLite consensus disorder prediction 157 182 - -
Lele10g0410 369 MobiDBLite consensus disorder prediction 207 233 - -
Lele10g0410 369 FunFam Glucan endo-1,3-beta-glucosidase 4 277 369 - -
Lele10g0410 369 MobiDBLite consensus disorder prediction 183 197 - -
Lele10g0410 369 MobiDBLite consensus disorder prediction 142 156 - -
Lele10g0410 369 MobiDBLite consensus disorder prediction 54 259 - -
Lele10g0410 369 Gene3D - 276 367 - -
Lele10g0410 369 Pfam X8 domain 283 353 IPR012946 -
Lele10g0410 369 MobiDBLite consensus disorder prediction 65 132 - -
Lele10g0410 369 SMART X8_cls 282 366 IPR012946 -
Lele10g0410 369 PANTHER BETA-1,3 GLUCANASE 278 366 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0410 Lele-ChrLele10 2884337 2886496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0410 283 367 Glycoside Hydrolase AT5G56590 45.349 3.84e-23 99.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0410 10 2884337 2886496 Lele10g0410 10 2884337 2886496 ECH
Lele10g0410 10 2884337 2886496 Lele11g0431 11 4295585 4299203 hybridization
Lele10g0410 10 2884337 2886496 Lele12g0870 12 16568270 16570359 hybridization