Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0405 ATGAGCGTGGATGCAAAAAGTGTCGCCTCTCAGCTTAATAGTTCTGGTCTGTTGCGGACTCAGGGCCTTGTTGGAGGCAAATGGAGTGATGCCTATGATGGCAAAACCATAAAGGTTTATAATCCAGCAAATGGTGAATCTATAGCAGATATTGCATGCATGGGTGGAAGAGAGACAAATGATGCAATATCCTCAGCCTATGACGCATTTCAATGTATGGGATTTCATACTTTCAGGATATATCCTTTTCTTGCTCTGCTGGATGCTAGCGTTTATAGAAAATTCTTTAGTATGTCTCTGGGTAGAACAAGGTATGATTTGCTAATGTCACACAAGGAAGAGCTTGCACAACTTATAACCTTAGAGCAAGGAAAGCCTCTTAAAGACGCTCTTGGGGAGATAAATTATGGGGCTAGTTTTATTGAGTTTTCAGCAGAGGAGGCAAGGCGTGTATATGGAGATATAATTCCTGCACCACTATCTGATCGACGATTATTTGTTTTAAAACAGCCTGTAGGGGTTGTTGGTGCTATCACACCTTGGAACTTTCCTTTGGCTATGATTACCCGGAAGGTTGGCCCAGCCCTTGCGTGTGGCTGTACAGTGGTCATTAAGCCCTCTGAACTTACTCCTCTCACAGCTTTGGCTTCAGCAGAGCTAGCAATTCAAGCTGGAATACCAGCGGGTGTTGTGAATGTAGTCATGGGAAATGCTCCTGAAATTGGGGATGCTATAATTGCAAGTCCACAGGTATCTCTGGAACTTGGTGGCAATGCCCCTTGCATAATATTTGATGATGCTGATCTTGATGTGGCAGTAAAAGGAACTATTGCAGCAAAGTTCCGTAATAGTGGACAAACATGTGTATGTGCAAACAGAATTCTTGTGCAAGAAGGTATCTATGAGAAATTTGCAGCCGCTATCCTTGATGCTGTTAAGAGTATGAAAGTTGGGGACGGTTTTAGTGAAGGTGTGATTCAGGGACCTCTAATCAATGAAGCTGCTGTGGAAAAGGTTGAATCCTTACTTCATGATGCTACCTCTAAGGGGGCGAAAATAATTCTTGGGGGTAAAAGACACAGCCTTGGATTCACTTTTTATGAACCTACAGTCGTCACTGATGTCAACAATGAGATGCGCATATCGAGAGAGGAAGTATTTGGACCAGTTGCTCCTCTTTTAAGATTTAAAACTGAGGAGGAGGCTATCAAAATCGCCAACGACACTAATGCAGGGTTGGGTTCCTATATATTTACAAACAGTGTTCAACGCTCTTGGCTTGTTGCTGAAGCTCTTGAATACGGACTCGTTGGTGTAAACGAAGGAGTAATTTCAACAGAGGTTGCTCCATTTGGTGGTGTTAAACAGTCTGGCCTTGGAAGAGAAGGCTCCAAATATGGAATGGACGAATTTTTGGAGATCAAATATGTTTGCTTGGGAAACATGAACAAAGAGTGA 1458 0.428 MSVDAKSVASQLNSSGLLRTQGLVGGKWSDAYDGKTIKVYNPANGESIADIACMGGRETNDAISSAYDAFQCMGFHTFRIYPFLALLDASVYRKFFSMSLGRTRYDLLMSHKEELAQLITLEQGKPLKDALGEINYGASFIEFSAEEARRVYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALASAELAIQAGIPAGVVNVVMGNAPEIGDAIIASPQVSLELGGNAPCIIFDDADLDVAVKGTIAAKFRNSGQTCVCANRILVQEGIYEKFAAAILDAVKSMKVGDGFSEGVIQGPLINEAAVEKVESLLHDATSKGAKIILGGKRHSLGFTFYEPTVVTDVNNEMRISREEVFGPVAPLLRFKTEEEAIKIANDTNAGLGSYIFTNSVQRSWLVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGNMNKE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0405 485 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 281 292 IPR016160 GO:0016491
Lele10g0405 485 FunFam Succinate-semialdehyde dehydrogenase I 257 446 - -
Lele10g0405 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 251 IPR016162 GO:0016491
Lele10g0405 485 SUPERFAMILY ALDH-like 17 483 IPR016161 GO:0016491
Lele10g0405 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 259 448 IPR016163 GO:0016620
Lele10g0405 485 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 253 260 IPR029510 GO:0016491
Lele10g0405 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 252 477 IPR016162 GO:0016491
Lele10g0405 485 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 250 482 - -
Lele10g0405 485 CDD ALDH_F5_SSADH_GabD 39 479 - -
Lele10g0405 485 FunFam Succinate-semialdehyde dehydrogenase, mitochondrial 9 259 - -
Lele10g0405 485 Pfam Aldehyde dehydrogenase family 250 477 IPR015590 GO:0016491
Lele10g0405 485 FunFam Aldehyde dehydrogenase, putative 449 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0405 Lele-ChrLele10 2781681 2791673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0405 1 485 Aldehyde Dehydrogenase Gene Family AT1G79440 71.037 0.0 714