Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0399 ATGGGGCATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGACTGTGGTCTCCTGAAGAAGATGACAAGCTCGTCAAATTCATTACAACTCATGACCACAAAAGTTGGAGTTCTGTTCCAAAACTTGCAGGGTTGCAGAGATGTGGCAAAAGTTGCAGATTGAGATGGATAAACTATTTGAGACCCGACCTCAAGAGAGGTTCCTTCACTGCCGATGAAGAACAAACCATTATTGACGTTCATCGAATTCTCGGCAATAGATGGGCTCAGATAGCGAAGCATCTACCTGGAAGAACAGACAACGAGGTGAAGAATTTCTGGAACTCGTGTATTAAGAAGAAATTCATATCTCAGGGCTTCGACCCTCAAACTCACAATCTTCTCTCTTCTCATGGACGTCCATCTCTTTCTCTTTCTTCTGTTTCTTCCAAATCTGAATCCACTTTCAGACTCGTCCATGAACCTCATCAACATAATAATACGAATAGTCTTCAGCCTTGTACCTCCGTACCCGTCTTCTCCATCGAATACCACCAACCTACTAATCATAATGTCTCTAACAGTAGTAATAATAATAATAATAATAATGTCCATGAACCTCATAATTTGCCCTTTGAACCATCCATTATTAATAATATCCCTGCGCCCAAGACCAATAATGATTGCTTATCTTCACTTGTCGGGTTTTCTGAGAATATTGACAACATATCATCATCATCATCAGTGTGGGTTTCTCGGGATGATCATATTCCAGAAACTGATCAGATCTTAAGATCAGCTCAGACGACATTAATGGAGGAAGGACAAATTACTGAAGCACGGTTATTAGAACAAGACAAGGACAAGAGGTGTACTACTGATAATAATATTAATTGTTTGGAGGGGTCAAGTGATAACAATAACTTTGATTTTGGGTTGTTGGAAGGTGTACTTAACTCTGAATATATGTCTTATGACGTTCTCTCTTCCATGGATGATGACTTTGCATGGAACTTTTAG 999 0.3974 MGHRCCSKQKIKRGLWSPEEDDKLVKFITTHDHKSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTADEEQTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKFISQGFDPQTHNLLSSHGRPSLSLSSVSSKSESTFRLVHEPHQHNNTNSLQPCTSVPVFSIEYHQPTNHNVSNSSNNNNNNNVHEPHNLPFEPSIINNIPAPKTNNDCLSSLVGFSENIDNISSSSSVWVSRDDHIPETDQILRSAQTTLMEEGQITEARLLEQDKDKRCTTDNNINCLEGSSDNNNFDFGLLEGVLNSEYMSYDVLSSMDDDFAWNF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0399 332 SMART sant 65 113 IPR001005 -
Lele10g0399 332 SMART sant 12 62 IPR001005 -
Lele10g0399 332 FunFam MYB transcription factor 10 66 - -
Lele10g0399 332 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Lele10g0399 332 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Lele10g0399 332 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Lele10g0399 332 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Lele10g0399 332 Gene3D - 10 66 - -
Lele10g0399 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Lele10g0399 332 Gene3D - 68 114 - -
Lele10g0399 332 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lele10g0399 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Lele10g0399 332 CDD SANT 16 60 IPR001005 -
Lele10g0399 332 CDD SANT 68 108 IPR001005 -
Lele10g0399 332 FunFam Myb transcription factor 68 115 - -
Lele10g0399 332 PANTHER MYB DOMAIN PROTEIN 55 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0399 Lele-ChrLele10 2731966 2734132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0399 1 332 MYB Transcription Factor Family AT3G12720 45.509 2.80e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0399 Myb_DNA-binding 9.2e-13 CL0123