Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0378 ATGCATGAGTACCGCCTAGACCAAGATGATGCCGATCAGCTTCAGGAAGATGGGTGGGTGGTGTGCAGGGTATTCAAAAAGAAGAACTTTAACAGAGGTTTTCAACCAGAAGTGGAAGAAGATGAGCAGATAATGAGCCACATGGCGTCAACAAGTACTGCTAATAATTGCATGAAGTTGTTCAGCCCAGAATCTGCAGTACCACCAACCCTTCCTTCTGCAACCTCTTCGTCCCCGTCGTCGACGTCGACGATGAACCCCATGGACGTCCTTCACTGTTCTCACAACTTGCTTAGGCTCGCTTCAACTTCTTCTTCTCATCCTCCTGGAGGACTCATTAGTAATCTCATGCAGCAGCAAGGTGATCAGAGACTCAATAATGGAGACTGGTCCTTCTTGGACAAGCTTTTAGCTTCACAACAACAACAACAACCTGTGGTTCCTCTTGTGGGGGCTTCTCCTCCTCCTCCTCCTCCTTCTTCCCAGAAGCTCCCTTTTCATTACCTTGCTTGTGATCAGAGTGACATCATGAAGTAA 537 0.4767 MHEYRLDQDDADQLQEDGWVVCRVFKKKNFNRGFQPEVEEDEQIMSHMASTSTANNCMKLFSPESAVPPTLPSATSSSPSSTSTMNPMDVLHCSHNLLRLASTSSSHPPGGLISNLMQQQGDQRLNNGDWSFLDKLLASQQQQQPVVPLVGASPPPPPPSSQKLPFHYLACDQSDIMK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0378 178 MobiDBLite consensus disorder prediction 149 163 - -
Lele10g0378 178 Gene3D NAC domain 1 31 IPR036093 GO:0003677|GO:0006355
Lele10g0378 178 SUPERFAMILY NAC domain 1 27 IPR036093 GO:0003677|GO:0006355
Lele10g0378 178 MobiDBLite consensus disorder prediction 143 164 - -
Lele10g0378 178 MobiDBLite consensus disorder prediction 66 85 - -
Lele10g0378 178 ProSiteProfiles NAC domain profile. 1 27 IPR003441 GO:0003677|GO:0006355
Lele10g0378 178 MobiDBLite consensus disorder prediction 68 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0378 Lele-ChrLele10 2544265 2545051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0378 1 139 NAC Transcription Factor Family AT1G79580 31.183 4.03e-12 61.6