Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0355 ATGGAGCTTGGTTTGACCTTGGGAGATCATGCTTCAAAGCCTTCTGAAGCTTCCAGCCTTCTGGGATTAGGCTTCAGTACCACTTTATCCATTGGTTCTTTCTGTAACAAAGCGTCAAATCAACAAGAAGAAGAAGAAGGACTGGAAGAAAAGGAAGCAAAAAAGCAAAAGGGAGAACAGAGTATTGAAGACCACGAAGATAGAGCTGAATTTATTCAGCTTGATCTTCTCCCTCACACTTCAGTCGCTGTTTCTCGCACTAACCCACCTTTGCAAATCTCATTTCCATGGCTTCCTTCTGAAAATGGAAGTTGTTCTAGGGGCGTGGATATGAATAGATTGCCGCCGCCGGCGGAGGAAGATGAGGCGGCGATGTCGTCGTCTCCGAACAGCGCTGCCTCGTCGTTTCAGATGGATCTCAGCGTGTTTAACAGAGGAGGGAGTAGTATCAGTGGTTGTAAGAGGGATTATGAGGGAGAGTTATATTATGATCAAAAGGCTGCTTCTTCAAGAGCAAGCGATGAAGATGACAACGTTGGTAGTGCGAGGAAGAAGCTAAGGCTGTCCAAAGAACAATCTGCTTTTCTCGAAGAGAGCTTCAAAGAACACAGCACCCTTAACCCAAAACAGAAACTTGCTCTTGCAAAACAGCTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAGGTAGATTGTGAGTACTTGAAGAGGTGTTGTGAGACACTAACTGAAGAGAACAGAAGGCTTCACAAAGAGCTTCAAGAACTGAGAGCTTTGAAAACTAATTCAAACCCATTCTTCATGCAATTACCAGCCACCACCTTGACCATGTGTGCCTCTTGTGAGCGAGTCGCCACCAACAATTCCACCGCCACCACTGCCACAACCACCACCATCGCTGCTGCCACTACGGTTTCTACTTCATCTGCGAATCCTTCTTCCACCAAAGTCACTGAAACAAGAGCCGCCATTGAACCTGAGTCATCATCCAAAGCCATTGGATTCCCTCTAAGCAAACCAAATTTCTATCCTTTTGCTCACACCAAAACCCACCATCCCCACCCATCCACACCCTCTTGA 1119 0.4656 MELGLTLGDHASKPSEASSLLGLGFSTTLSIGSFCNKASNQQEEEEGLEEKEAKKQKGEQSIEDHEDRAEFIQLDLLPHTSVAVSRTNPPLQISFPWLPSENGSCSRGVDMNRLPPPAEEDEAAMSSSPNSAASSFQMDLSVFNRGGSSISGCKRDYEGELYYDQKAASSRASDEDDNVGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTNSNPFFMQLPATTLTMCASCERVATNNSTATTATTTTIAAATTVSTSSANPSSTKVTETRAAIEPESSSKAIGFPLSKPNFYPFAHTKTHHPHPSTPS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0355 372 Coils Coil 252 275 - -
Lele10g0355 372 Pfam Homeobox associated leucine zipper 239 273 IPR003106 GO:0006355|GO:0043565
Lele10g0355 372 SMART HOX_1 181 243 IPR001356 GO:0003677
Lele10g0355 372 SMART halz 239 283 IPR003106 GO:0006355|GO:0043565
Lele10g0355 372 ProSitePatterns 'Homeobox' domain signature. 214 237 IPR017970 GO:0000981|GO:0006355
Lele10g0355 372 Pfam Homeodomain 183 237 IPR001356 GO:0003677
Lele10g0355 372 ProSiteProfiles 'Homeobox' domain profile. 179 239 IPR001356 GO:0003677
Lele10g0355 372 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 43 317 - -
Lele10g0355 372 SUPERFAMILY Homeodomain-like 171 240 IPR009057 -
Lele10g0355 372 CDD homeodomain 183 240 IPR001356 GO:0003677
Lele10g0355 372 Coils Coil 48 68 - -
Lele10g0355 372 MobiDBLite consensus disorder prediction 318 338 - -
Lele10g0355 372 FunFam Homeobox-leucine zipper protein 18 168 244 - -
Lele10g0355 372 MobiDBLite consensus disorder prediction 42 65 - -
Lele10g0355 372 MobiDBLite consensus disorder prediction 318 350 - -
Lele10g0355 372 MobiDBLite consensus disorder prediction 36 65 - -
Lele10g0355 372 MobiDBLite consensus disorder prediction 112 132 - -
Lele10g0355 372 Gene3D - 187 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0355 Lele-ChrLele10 2392176 2393589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0355 166 297 Homeobox Transcription Factor Family AT4G37790 75.373 1.23e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele10g0355 Homeodomain 1.4e-15 CL0123