Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0352 ATGGAAAACCAACCCGGAAGCCCAGACACTAATCCACACCACCACAAGTGGGGGACCTTGGATGAGCTCTTGCTTGCCTACGCCGTCCAGCGTCATGGCTCTAAGGATTGGGACGCCGTCGCCATGGAGGTTCAGACCCGGACCACCCTCCCCCATCTCCTCGTTACCGCCCACCACTGCCGCCAGAAATTCCTCGATCTCAGACGCCGATTCGCCGCCCACCGCGACGATGCCGTCCCCGACAACGTCGCCGCCGGGGACGACGTCGATCATGTCCCGTGGCTTGACGAATTAAGGAAGCTTCGTGTCGCTGAACTCCAGGCAGCCGTACAGCGCTCCGACGTCTCCATTCTGTCGTTGCAGCTGAAGGTGAAGAAGTTGGAGGACGAGAGAGGGAAGAGTTTGAAGGAAAACGTCGGAGAAGAGGGAGAAAAACCAGATCAGGTCGTCTCCGGCGACCTGAAATCGCAAAACGACAAAAAAGGCGGACCTGAAAAAGTTTTTGGGCCAGCGAGGGCCGAACCGGCGACGCGGCCCGACGAGGATCATAATATTAAGCAACCGACAAGTGACGAATCCGACCGGGAAAACCTATCCGTGAATGAGTCTAACTCGACGGTTTCCGTTGGGAAAACCGGGGAGGGAGAAGTTAAACTAGAACCGAACCCGGTCCATACCGACCCGAATGAACCGGATGCGGTCGAGAGGAAGGCCAATCCGCTCGGAGAAGAATCTAATAACAGAAGCTACGATGCGGCGGCGAAAGTGCCAACGGGTGATTCACTTCCACCGAGCGAGGAGAGGAAGGTGGAGGACTCGTCTGAGTTGCGAGACTCGGTGACGCACTCGAGGGATGGTGGTGGCGAGGGAGGGACGAGGGAGAGCAGTGAGGTGCAGAGCTCGGCGAGTTTGACGAAGAAAAGAAAGCCGAGGCGGAGGAAGGAGGAGGACGAGGAGCTGCAGGAGAACGACGAGGTGGCCGTGAAAGTTCAGCCGTTGATCGGGGTGTTAGATTTAGTCAAAGGTCACGATCACAGCTTGTTCGAGCGCCGTCTCGAGAGTCAGGGAATAGAAAAATACATAAACACAGTACGGCAGCCAATGGATTATGAAACCATACAAGGGCGACTCCGAAACGGCACTTATTCCCGCTGCACTCATGCTTTCTTCCGTGATCTCCTCCTCCTCTTCACCAACGCCGCCGCCGTCTTCCCCAAAGACTCTGCTGAATCATGCGCTGCACATCAGTTGGGCCACCTTGTCTCGGCCGAGATTGCACACCACATCCCTGTGACCCGACCGGAGCCAGCCCCATCCAACCCATCATCGTCATCAAAACCAGACCCCGATTCACTTTTGTCAAAACACAAAGCTTCTGCTCCTATATTGGTCTGCAGGAAACGCAGTGCATTCTTAGCCTCCGCTACCTTTGGCCAAAAGAAGAAGCCAGCTTCAGATACAAAACCACCCCTATTGAAGCCATTTTCTGATACAGATGATGAACCTCCCCAGAAAAAGGAAATGCCGGTCACCAGAGTAAGAAGCCTGAGAAGGAGCAACAAAAACCTCACCGGCGACTCCACCAAGAAGGCAGGCACGGCCAGCAAGCCACCAGAGCCGCCGAAACCGGATAAGAACAAAGCAGAGGCTTCTGCAGGATCAGATAAAAAGAGGAGCGCAGCAGCGGATTTCTTAAAAAGGATAAAGCGAAGTGCTCCGGCGGAGTCATTGAGAAGTAGTGGTGGTAATAGTAGCAAAGGTGGGGGAAGTAGTGGAAAAGACCAGAAGAAGATGATCAGTGTTGGCAAAGGGGACAAAGGGAAAGAAAAAGCGACCAAGCAAGGCCACGGCAGTAGGAGCTCCGGCGACAAAAAGAATGAGAATGAGAACAGTAGTCAATCGAAGAGGAGTGTAGGGAGGCCTCCGAAGAAGGTGGCAGAAAGTAGTAATGTTTCAGCAAAGCGGGGGAGGGAAAGTGGTGGAAAGGATAAAAGGCCCAAGAAGCGATCAAAGAGGTAA 2019 0.5419 MENQPGSPDTNPHHHKWGTLDELLLAYAVQRHGSKDWDAVAMEVQTRTTLPHLLVTAHHCRQKFLDLRRRFAAHRDDAVPDNVAAGDDVDHVPWLDELRKLRVAELQAAVQRSDVSILSLQLKVKKLEDERGKSLKENVGEEGEKPDQVVSGDLKSQNDKKGGPEKVFGPARAEPATRPDEDHNIKQPTSDESDRENLSVNESNSTVSVGKTGEGEVKLEPNPVHTDPNEPDAVERKANPLGEESNNRSYDAAAKVPTGDSLPPSEERKVEDSSELRDSVTHSRDGGGEGGTRESSEVQSSASLTKKRKPRRRKEEDEELQENDEVAVKVQPLIGVLDLVKGHDHSLFERRLESQGIEKYINTVRQPMDYETIQGRLRNGTYSRCTHAFFRDLLLLFTNAAAVFPKDSAESCAAHQLGHLVSAEIAHHIPVTRPEPAPSNPSSSSKPDPDSLLSKHKASAPILVCRKRSAFLASATFGQKKKPASDTKPPLLKPFSDTDDEPPQKKEMPVTRVRSLRRSNKNLTGDSTKKAGTASKPPEPPKPDKNKAEASAGSDKKRSAAADFLKRIKRSAPAESLRSSGGNSSKGGGSSGKDQKKMISVGKGDKGKEKATKQGHGSRSSGDKKNENENSSQSKRSVGRPPKKVAESSNVSAKRGRESGGKDKRPKKRSKR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0352 672 MobiDBLite consensus disorder prediction 262 291 - -
Lele10g0352 672 MobiDBLite consensus disorder prediction 477 672 - -
Lele10g0352 672 MobiDBLite consensus disorder prediction 134 323 - -
Lele10g0352 672 MobiDBLite consensus disorder prediction 598 631 - -
Lele10g0352 672 CDD Bromodomain 329 425 - -
Lele10g0352 672 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 11 672 - -
Lele10g0352 672 SMART bromo_6 326 430 IPR001487 GO:0005515
Lele10g0352 672 MobiDBLite consensus disorder prediction 576 591 - -
Lele10g0352 672 SUPERFAMILY Bromodomain 329 428 IPR036427 GO:0005515
Lele10g0352 672 MobiDBLite consensus disorder prediction 134 149 - -
Lele10g0352 672 MobiDBLite consensus disorder prediction 175 198 - -
Lele10g0352 672 MobiDBLite consensus disorder prediction 431 455 - -
Lele10g0352 672 MobiDBLite consensus disorder prediction 540 573 - -
Lele10g0352 672 CDD SANT 16 48 IPR001005 -
Lele10g0352 672 MobiDBLite consensus disorder prediction 493 514 - -
Lele10g0352 672 MobiDBLite consensus disorder prediction 515 531 - -
Lele10g0352 672 Gene3D - 322 429 IPR036427 GO:0005515
Lele10g0352 672 Pfam Myb-like DNA-binding domain 16 67 IPR001005 -
Lele10g0352 672 ProSiteProfiles Bromodomain profile. 348 411 IPR001487 GO:0005515
Lele10g0352 672 MobiDBLite consensus disorder prediction 218 242 - -
Lele10g0352 672 Pfam Bromodomain 338 410 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0352 Lele-ChrLele10 2363923 2367030 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele10g0352 Bromodomain 5.4e-09 No_clan