Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0347 ATGTGGAGATTTAAGACATTCACACATAAAGAGTCGGCTGGGCTTGAAGGACGCACTATAGATGTTGGCAATCTTAAAATAAATGTTCAAAAGGCCATCGCTGAAGGGGGGTTCTCTTGTGTCTACTTGGCTCGTGATGCTATACACATGTCAAAACAGTTTGCTTTGAAGCACATTATATGCGATGATGAAGAATCCCTTGGATTGGTGCTGGAGAGCCGAGGAGCGGGGTATTTTGATGAGCAACAGGTTTTATTGATCTTCAGGGATATATGCAATGCAGTTTTTGCAATGCACTGCCAATCCCCACCTATTGCTCACCGAGACTTAAAAGCTGAAAATCTTCTATTAGCTTCCGATGACTTGTGGAAATTGTGTGACTTTGGAAGCGCATCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGACAATATCAGAAAGTACACAACTCCTGCCTATAGGGCCCCTGAGATGTGGGATCTGTTTCTGAGAGAAGTCGTTAATGAAAAAGCGGACATATGGGCTCTTGGGTGTCTTCTCTTTCGCATATGCTACTTCAGGAGTGCATTTGATGGAGAATCCAAGCTTCAAGTTCTTAATGGAAACTATCGCATCCCTGATTTACCTAAATACAGTTCATCCATTGTAGACTTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGCAAGCGCTTTGCTTGATTGGACATTCATCTCCATGAATTTAGGTTGGTCTTAG 777 0.4299 MWRFKTFTHKESAGLEGRTIDVGNLKINVQKAIAEGGFSCVYLARDAIHMSKQFALKHIICDDEESLGLVLESRGAGYFDEQQVLLIFRDICNAVFAMHCQSPPIAHRDLKAENLLLASDDLWKLCDFGSASTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVVNEKADIWALGCLLFRICYFRSAFDGESKLQVLNGNYRIPDLPKYSSSIVDLIRDMLQARPDDRPDITQASALLDWTFISMNLGWS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0347 258 SMART serkin_6 27 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0347 258 Gene3D Phosphorylase Kinase; domain 1 19 69 - -
Lele10g0347 258 Gene3D Transferase(Phosphotransferase) domain 1 70 250 - -
Lele10g0347 258 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0347 258 PANTHER SERINE/THREONINE PROTEIN KINASE 1 71 - -
Lele10g0347 258 Pfam Protein kinase domain 76 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0347 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Lele10g0347 258 SUPERFAMILY Protein kinase-like (PK-like) 28 244 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0347 Lele-ChrLele10 2340222 2341424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0347 79 241 MAP Kinase Kinase Kinase AT5G11850 27.811 1.10e-15 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lele10g0347 Pkinase 7.3e-26 CL0016