Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0339 ATGGCTCCCAAGCAGAGAACACCAAAGGTGAGCAGAAATCCTGAATTGATTAGAGGGATTGGTAAGTATTCCAGGTCGAAGATGTACCACAAGAGAGGCCTCTGGGCCATCAAGGCCAAAAATGGAGGCGTTTTCCCTCGTCACGATGCGAAGCCCAAGCCTGAAGCTCCTGAGGAGAAACCTCCCAAGTTTTATCCCGCCGACGATGTCAAGAAGCCCTTGGTCAACAAGCATAAACCGAAGCCTACTAAACTCAGGGCTAGCATTACTCCCGGTACCGTGCTGATTCTTCTTGCCGGAAGATTCAAGGGAAAGAGAGTCGTTTTCCTGAAGCAGCTTCCTTCTGGGTTGCTCCTTGTTACTGGTCCATTTAAGATTAATGGAGTTCCATTGAGGCGTGTTAGCCAATCTTATGTGATCGGCACCTCCACAAAGGTTGATATTTCTGGAGTCAATGTTGAGAAATTTGACGACAAGTACTTTGCCAAGAAGACTGAGAAGAAGAAGAAAAAGGGAGAAGGAGAGTTTTTTGAGGCTGAAAAAGAGGAGAAAAATGTCATCCCCCAAGAGAAAAAGGATGACCAGAAAACCGTGGATTCTGCTTTGTTAAAGGCCATTGAGAGCGTCCCAGAATTGAAGGCTTATTTGGGTGCAAGGTTCTCTCTCAAGGCTGGCATGAAACCTCATGAACTAGTCTTCTAA 702 0.463 MAPKQRTPKVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPEEKPPKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKVDISGVNVEKFDDKYFAKKTEKKKKKGEGEFFEAEKEEKNVIPQEKKDDQKTVDSALLKAIESVPELKAYLGARFSLKAGMKPHELVF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0339 233 PANTHER 60S RIBOSOMAL PROTEIN L6 3 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele10g0339 233 CDD KOW_RPL6 81 233 IPR041997 -
Lele10g0339 233 Gene3D - 87 171 IPR014722 -
Lele10g0339 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele10g0339 233 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Lele10g0339 233 MobiDBLite consensus disorder prediction 43 84 - -
Lele10g0339 233 MobiDBLite consensus disorder prediction 44 76 - -
Lele10g0339 233 FunFam 60S ribosomal protein L6 87 171 - -
Lele10g0339 233 SUPERFAMILY Translation proteins SH3-like domain 87 176 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0339 Lele-ChrLele10 2292246 2294088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0339 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 84.549 4.50e-128 360