Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0334 ATGGCTCAGAGAACGGAAAAGGAAGAAACCGATTTTAAGGTGCCTGAAACCATAATCCCCTGCGTCAACAACTGCGGCGTCACCGGAAATCCGGCTACCAATAATATGTGCCAGAACTGCTTCAACGCCACCACCTCCGCTGCTGCGTCTTCCTCAACCTCGCCGTCATCTGCCTCTTCCTCTGCCGCTGGAGTTTCAGCGCCTTCTAAATTTGTCGATGACAAGTCTTCTTCTAGATCTACAGCGTCTCGGTCTCCTAAGAGATCCTATCCTTCCGATGACTCTACGCAAACGACGGATCGGGCGAAGACGGACGAGGTGGTGCCGTCTGAAGCGAAGCGGGTGGTGAATCGGTGCTCCGGATGCCGGAGGAAGGTCGGGTTGACGGGGTTCCGGTGCCGGTGCGGGGAGTTGTTCTGTGCTGAGCATAGGTACTCCGATCGTCATGATTGCAGCTACGACTACAAAGCTGTTGGACGTGAGGCGATCGCGAGGGAGAATCCGGTGGTCAAAGCCGCGAAGATCGTGAAAGTTTGA 537 0.5512 MAQRTEKEETDFKVPETIIPCVNNCGVTGNPATNNMCQNCFNATTSAAASSSTSPSSASSSAAGVSAPSKFVDDKSSSRSTASRSPKRSYPSDDSTQTTDRAKTDEVVPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAVGREAIARENPVVKAAKIVKV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0334 178 MobiDBLite consensus disorder prediction 47 97 - -
Lele10g0334 178 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 99 - -
Lele10g0334 178 FunFam Zinc finger AN1-type containing 6 92 174 - -
Lele10g0334 178 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 62 - -
Lele10g0334 178 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Lele10g0334 178 Pfam A20-like zinc finger 19 42 IPR002653 GO:0003677|GO:0008270
Lele10g0334 178 Gene3D - 91 174 IPR035896 -
Lele10g0334 178 MobiDBLite consensus disorder prediction 47 108 - -
Lele10g0334 178 SMART AN1_Zf_4 119 156 IPR000058 GO:0008270
Lele10g0334 178 ProSiteProfiles Zinc finger AN1-type profile. 113 159 IPR000058 GO:0008270
Lele10g0334 178 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 177 - -
Lele10g0334 178 Pfam AN1-like Zinc finger 119 156 IPR000058 GO:0008270
Lele10g0334 178 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Lele10g0334 178 Gene3D - 1 65 - -
Lele10g0334 178 SUPERFAMILY AN1-like Zinc finger 101 172 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0334 Lele-ChrLele10 2263113 2263649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0334 8 178 C2H2 Transcription Factor Family AT3G52800 37.791 1.98e-32 112