Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0329 ATGGAGAGGTTCAAGCAACTTCAACAAGAACAGGAGAAGAAAAATGAAAAATTAGAGGATTCTAAACCCATTAAAATTGTTTCAGGCTCTTTGACTTCTAATCTTTCTATTAGTAAAAAGAACTCTGCAGACTTGACGGCTAGTACACAGAAAACATCCCAGGCGGTTTCCAGTGGAAAACTTGCATTCAGTTTAAAACAAAAGTCAAAGCTAGTGCCTCCACCTGTTAAGTTAAGTGGAGATGAAGAAGAAGAAACCGATGGTAGTAATGTTTTGAGTGATGTGCCTCTAAAACGACAAAAGTTGGGGCGTGAAGATGGCATTGAGAGATCATCAAGACAATCTGATGATGCACCTCCTTCCCCACGTGATCCTACAGTGAAGAAAGTTGCTGAGAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGTCAAAAAAATCCAGGGAATACACCTTTCAAGTTTTTATTTGACGAAAAATGTGCTGACTACAAATATTACGAATATCTACTAGCCCAGGAGGAAAAGGCTCTAGGGCAGCCTCGGGAATCACAGACATCACGTAACGGGGGTACAAGCTTCTCATCTTCTAGACCAACCAATGTTCCTCGGAGATCATCTCAGCAGCATTCAACTTACCAAATTCCTGCATCTGCTCTGTATGAAAGTTCTGAAGATCCTGGAGTTTATGGATCTTCAGGTCAAGCAGCATCTGGAGGAAGTGCTTATGAACATGGTGGATCATCAAATGCTGATTCTTTGGCATTAATGGAGTTCTACATGAAGAAAGCTGCACAGGAAGAGAAGATGAAAAAACCTAAGCAATCTAAAGATGAAATGCCCCCTCCTGCATCTCTTCAAGCTTCTTCTAAAAAAGGTCATCACATGGGTGATTACATTCCCCAAGAAGAACTAGAGAAGTTCTTGGCTACCTGTAATGATGCAGCAGCGCATAAAGCTGCCAAGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGTCACAAGCTTTTGTCAAAAATGGGATGGAAAGAAGGTGAGGGTCTTGGCAGCTCCAGGAGTGGTATTTCAGATCCAATCATGGCCGGTAATGTTAAGATGAACAACTTGGGGGTTGGTGCAAATAACCCTGGGGACGTGACTCCTGAAGACGACATGTACGAGCAGTACAAAAAGAGGATGATGCTCGGCTATCGTTACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTATTGA 1266 0.425 MERFKQLQQEQEKKNEKLEDSKPIKIVSGSLTSNLSISKKNSADLTASTQKTSQAVSSGKLAFSLKQKSKLVPPPVKLSGDEEEETDGSNVLSDVPLKRQKLGREDGIERSSRQSDDAPPSPRDPTVKKVAEKLASFVAKNGRQFEDVTRQKNPGNTPFKFLFDEKCADYKYYEYLLAQEEKALGQPRESQTSRNGGTSFSSSRPTNVPRRSSQQHSTYQIPASALYESSEDPGVYGSSGQAASGGSAYEHGGSSNADSLALMEFYMKKAAQEEKMKKPKQSKDEMPPPASLQASSKKGHHMGDYIPQEELEKFLATCNDAAAHKAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRSGISDPIMAGNVKMNNLGVGANNPGDVTPEDDMYEQYKKRMMLGYRYRPNPLNNPRKAYY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0329 421 SUPERFAMILY Surp module (SWAP domain) 118 180 IPR035967 GO:0003723|GO:0006396
Lele10g0329 421 Pfam Surp module 130 179 IPR000061 GO:0003723|GO:0006396
Lele10g0329 421 Gene3D Surp module 111 184 IPR035967 GO:0003723|GO:0006396
Lele10g0329 421 MobiDBLite consensus disorder prediction 65 128 - -
Lele10g0329 421 MobiDBLite consensus disorder prediction 98 128 - -
Lele10g0329 421 MobiDBLite consensus disorder prediction 234 254 - -
Lele10g0329 421 MobiDBLite consensus disorder prediction 1 22 - -
Lele10g0329 421 SMART surpneu2 128 182 IPR000061 GO:0003723|GO:0006396
Lele10g0329 421 SMART G-patch_5 336 383 IPR000467 GO:0003676
Lele10g0329 421 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 1 421 IPR040169 -
Lele10g0329 421 MobiDBLite consensus disorder prediction 185 225 - -
Lele10g0329 421 ProSiteProfiles G-patch domain profile. 338 385 IPR000467 GO:0003676
Lele10g0329 421 Coils Coil 1 21 - -
Lele10g0329 421 MobiDBLite consensus disorder prediction 271 300 - -
Lele10g0329 421 MobiDBLite consensus disorder prediction 183 254 - -
Lele10g0329 421 ProSiteProfiles SURP motif repeat profile. 130 173 IPR000061 GO:0003723|GO:0006396
Lele10g0329 421 Pfam G-patch domain 339 382 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0329 Lele-ChrLele10 2228949 2232931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0329 327 394 C2H2 Transcription Factor Family AT5G26610 40.580 1.68e-08 53.9