Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0328 ATGTTGAATCTAAAGGCTGTGTTGTCCTTCTCAATTCTGATGTTCTATTGTTTTTATGCAAAATGTCAAACGTTAGACTTCCAAGCTCCACGAGCAACACATGTAAATGTGAATTGCGTTGACATTGTTGAATTGTCATCTTATTACTTCATACATATCGAATTACTCCAACTTGTAATCGCCATGAGTAATGTTTATAGTCCTGCTCTCAAATACTCAGGAAACTACTCAGAAGTGGATTCTAAAATCATCCATATAGAACAACAACAGCAACAACGTTGTCATCATCATCCGCAGCAGCCGCAGCAGATTTCTGGGCTATTAAGGTACCGTTCTGCTCCAAGCTCATTGCTGGCAAACGTGGTGGAAAGAGAAGGAGGTTGCAGCAGAGGTTTGGATCATCATCATCAACAACAACATGAGAGAAGATGTTATGTTCCATCGTTTGATGCAGAAATGGAAGGCATGCTAGATTCTTCAGGTTGCAACAGTGGATGGAGCAATGTGAAGCATGAAGAAGGAGGAGGAGGAGGTTCTGTTTTCTGTAATGCGAGTGATCAGCTAAGGATTTATAATTCTGAGGGGGGATTTCAAGAATTTGCAGTAAGTGGTGGGTCATGTTCAAGTGTGATGATGATGACGATGAACACGAAAAGTATTATGGGTTTTCAGAACTCCACTCAATCCAAAATGGCTTCTGCCAATTATTCCAATAATAATCTTCTCCTCAGACAGAAGAGCTCACCTCCTGGATTTTTCTCCAATTTCTCTCTCACAAATGCACTGGGAGAACAAGCTACAACATCCACTAGAAGATTGCCACAGATTGCAGAAAATGGGAATGAAACCCTAGAACACCAAGAAGAACAGGCAGAAGAAGCAGAAGCAAGAAACTCTGTTGAAACTAGAAGCCTGAGAAATGATCATGGAAGCCACCAGAAAAGTTATATGCCCAGTTTCACAAGTGACTTGTGGGAAAGTTCTTCATTCACAGCTCATAAAACAACAGCCAGTGACGGCAATGAATTCCTGTTTTCTACTTCAGATGCCTTGGAATCTCAGCAAGCAGATGAGCTTGGATATCAGAATAATGTTGGCTTAAGTCATCAAATGAGTTTGCCAAGTTCATCAACTAAGGCACGTGGCATAGAGAGGATTTTCCATGTTCAAGGATCTGTTCCCTGTAAAATTAGAGCCAGAAGAGGCTTTGCTACTCACCCCCGAAGCATTTCAGAGAGGTTAAGAAGAACAAGGATTAGTGAAAGAATAAAGAAGCTACAAGAGCTTTTCCCAAAATCAGACAAGCAAACAAACACAGCAGATATGTTAGATTTGGCTGTTGATTATATTAAAGAACTGCGAAAACAAGTCCAGATACTAACAGATACAAGGGCAAAGTGCAGATGCTTGCGTGTTCATCAAAAACAATATCTATCATGA 1440 0.4056 MLNLKAVLSFSILMFYCFYAKCQTLDFQAPRATHVNVNCVDIVELSSYYFIHIELLQLVIAMSNVYSPALKYSGNYSEVDSKIIHIEQQQQQRCHHHPQQPQQISGLLRYRSAPSSLLANVVEREGGCSRGLDHHHQQQHERRCYVPSFDAEMEGMLDSSGCNSGWSNVKHEEGGGGGSVFCNASDQLRIYNSEGGFQEFAVSGGSCSSVMMMTMNTKSIMGFQNSTQSKMASANYSNNNLLLRQKSSPPGFFSNFSLTNALGEQATTSTRRLPQIAENGNETLEHQEEQAEEAEARNSVETRSLRNDHGSHQKSYMPSFTSDLWESSSFTAHKTTASDGNEFLFSTSDALESQQADELGYQNNVGLSHQMSLPSSSTKARGIERIFHVQGSVPCKIRARRGFATHPRSISERLRRTRISERIKKLQELFPKSDKQTNTADMLDLAVDYIKELRKQVQILTDTRAKCRCLRVHQKQYLS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0328 479 FunFam Transcription factor bHLH130 family 404 473 - -
Lele10g0328 479 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 403 453 IPR011598 GO:0046983
Lele10g0328 479 MobiDBLite consensus disorder prediction 284 310 - -
Lele10g0328 479 SMART finulus 409 459 IPR011598 GO:0046983
Lele10g0328 479 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 406 469 IPR036638 GO:0046983
Lele10g0328 479 MobiDBLite consensus disorder prediction 284 317 - -
Lele10g0328 479 CDD bHLH_AtbHLH_like 408 460 IPR045239 -
Lele10g0328 479 Pfam Helix-loop-helix DNA-binding domain 409 453 IPR011598 GO:0046983
Lele10g0328 479 Coils Coil 277 304 - -
Lele10g0328 479 Gene3D - 400 464 IPR036638 GO:0046983
Lele10g0328 479 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 113 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0328 Lele-ChrLele10 2219010 2228695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0328 105 470 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 34.293 8.37e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele10g0328 HLH 2.9e-09 No_clan