Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0318 ATGATAATGGGGAGGGACAAGAACAGTAGTAAGAACAATAACAACAACAACAACGTTGTGAAGCTAAGGAAGGGGTTGTGGTCGCCGGAGGAAGATGAGAAGCTGATAAGGTACATGTTGACGAATGGACGAGGTTGTTGGAGTGACATTGCCAGAAATGCAGGCCTTCAACGTTGTGGCAAAAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTTAAGAGAGGTGCTTTCTCTCTCCAAGAAGAACAACTCATTCTTCATTTTCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGTCTTCCAGGACGCACAGATAATGAGATCAAGAATTTCTGGAACTCAACTTTAAAGAAAAGGATGAAAAACAACACTACTTGTACTTCTGCAACTACTACTACTTCCACCGCAACTCCTTCACCAAACAACAGTACAGATTCATCATCAAATCATCATATTATCACCACCACCACCACTTCCTCCATGCCCTTCATGAACATGACCATGTGCATGGACTCATCACCTTCATCAATATCATCGTCTTCATCAGCGTCCGTACAACCCATGCAAACCGCAGCAGCTTTTGGTGGTGACCACCGGTTAAATATGGAGTATCCCTTTTCCATGTTGAATAATAACAGTCATATTCCTTATGATATGCCTGCATGCTTAACCCAAGTTGGTGGTGGTTGGGGTGGCCATGGCATGGTGGAGGATGGGTTTTATGGTGAAGATTATAATAATAATAATCGGATGGTGTTAGGGGGAGAAGATAGTGGAATAATGGGGTTAGAAAGAGATCTGTGTCTTCCTCCTCGAGAGAGTAGAAGCATGGAAGAGAAGTATAATAGTACTGATGTTGCTATTGATCATGTGAGAAGTCATATCAACAACAACAACCATTTTAATAATGGTTGCTTCAATAACACTGATCATCACCATCATCATCAGGACTTGGTTGGCTTTGGAAATAATAATAATCATGGCCAATCAGGGGAAAGCTTAAGAATGGGAGAATGGGATTTGGAGGGTATGATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTCCAAGTTGAATGA 1098 0.418 MIMGRDKNSSKNNNNNNNVVKLRKGLWSPEEDEKLIRYMLTNGRGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEEQLILHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNNTTCTSATTTTSTATPSPNNSTDSSSNHHIITTTTTSSMPFMNMTMCMDSSPSSISSSSSASVQPMQTAAAFGGDHRLNMEYPFSMLNNNSHIPYDMPACLTQVGGGWGGHGMVEDGFYGEDYNNNNRMVLGGEDSGIMGLERDLCLPPRESRSMEEKYNSTDVAIDHVRSHINNNNHFNNGCFNNTDHHHHHQDLVGFGNNNNHGQSGESLRMGEWDLEGMMQDISSFPFLDFQVE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0318 365 PANTHER MYB DOMAIN PROTEIN 55 17 318 - -
Lele10g0318 365 Gene3D - 78 149 - -
Lele10g0318 365 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Lele10g0318 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Lele10g0318 365 Pfam Myb-like DNA-binding domain 27 87 - -
Lele10g0318 365 SMART sant 23 73 IPR001005 -
Lele10g0318 365 SMART sant 76 124 IPR001005 -
Lele10g0318 365 FunFam MYB transcription factor 21 77 - -
Lele10g0318 365 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Lele10g0318 365 MobiDBLite consensus disorder prediction 129 158 - -
Lele10g0318 365 CDD SANT 79 122 IPR001005 -
Lele10g0318 365 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Lele10g0318 365 Gene3D - 21 77 - -
Lele10g0318 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 71 IPR017930 -
Lele10g0318 365 CDD SANT 27 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0318 Lele-ChrLele10 2129081 2132583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0318 16 365 MYB Transcription Factor Family AT3G08500 43.503 5.22e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0318 Myb_DNA-bind_6 2.6e-13 CL0123