Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0312 ATGATTAGACCTAGAAGATCACGAACTGTTATAGTGAATGGATCAGAAGCCAACAAGTTCTTCTTGACCAATGAGTTCAAGCTCTTGAAAAGCTCTTGGCCTTCGTCTTCAGTTCAGCTCATAGGGAAGGACTCAATCATGAAGAAAGATGGCGAAAGGCATCGATTCCTTCATGGTGTTATAGTCACAAGCTTTGGTCATTCTGGTCTTGAGACCATTGTGGCAAAGATCTGTAACTCAGTTCAGCTTCATATTTCCAGTAACTGGCATGGCCAAAAAATGATTCACCTGTACAAATCTCGGCGGCCTTTAAAGATTCTAGTTCAAGGATTCCCTCGGAGTCTCCACACTGTAGCGGCCAAGAATGGATTCCTCGATGACGTCGTCTGGCTTCAGGAATTCCTCACCTCGGACTCCTCTCTCACCGTGCAAGTCGCGGTCCCCAAGGTTCTGCAACCATTACCGCCGCCGCCCGGGCAATTGCGTTCCTCGGTGGTCGGAGATGCGGTGGACGAGACGGCTTCGATGCAGGCCAAGCGGGTCACTCTGCAGCGGAAGGGAGCTGCCGCCATGATTGCAGCCGAAGAGTACGCCCGTCGTTTCGAGTTCGGGGAGGATAAATCAGGAAATAACACCGGAGAAGAGTGTAGTGAATCAGATGTCAGAGTTTTTTGTCGGATGTGCAACTGTGTGGAAAATGAAGGCAGTGATAGAGAGAAAAAGATGCTTTCTTGCAAAAGTTGTGGTAAAAAGTACCACAGAAACTGCCTAAGAACTTGGGCTCAACATAGAGATTTATTTCGTTGGACTTCATGGACCTGTCCTGCTTGCCTAATTTGTGAGTTTTTGTATGATAAGTTGCTTGCAGAAGGACCGGAGATCCAAGTAAGTTCATGTTCTGCAAAAGGTGCGATGGTGCTTACCATTGCTATTGTCTACAACCTCCTCAAAAGATTCAGCACTAATCATCTGAGAGATGTTTATAGAGATTCGGAATTGACCCCCATGGTTTGCTGCGATATTTGCCAGCGCTGGGTACATTGCCATTGTGATAATATTAGTGATGAAAAATATCACCAATTTCAAGTAGATGGGAATCTGCAGTATAAATGTTCTGCATGTCGTCGTGAATGTTATGAGGTCAAAAATCTTAAAGATGCCATTCAAGAGCTCTGGAGGAGAAAGGATATGGCTGACAGAGATTTAATTGCAAGCTTGAGGGCTGAGGCTGGTTTACCAACTCAAGAAGAAACTTTTTCTATTTCACCATATTCAGATGATGACAACAGTGAACCTGTGAAAGTAAAGAGTGAATCTGGGCGTTCCCTTAAATTTTCTTTAAAGACTTTCTGTGATAACCTGCCAAAGAAAATTAAGGATAGGGGAAAGAAACATTCAAGTAAAAGATATGCTAAAGAAAAAGACCGTCAGTCATTTATACCTGGCAAAAACGATCCACACCAAATTTTTGAAGGAAATAGTGATATTGAGTATTTGCATAGCTCTGGTGATGATATCAAATCTCAGAGAAATGAAGTTGCCAATGTCAATTCTTCGCTTGCTGCTGGATTTCCTGTCAATCAGTCCGGGATATTGAAGCGCAAGTTTATAGAAGAGGTGTCATTTAGTGATGAAGAGCGGAAAACTAGAGTTCTACCAATTACGAGCAATAATAAGGCACATGGTGTAGATCGTGAAGAGGAGACTATAGAAAATGACAAGAAGACTCAAAATGTGAAAGGGAAAAAGTCGATTATCAATTTGACGGCACAGAAAACTAATATGACTAGTTATCCACAATCTGATGCCTTAAGTTGCCAAAAAGATCAAGATATGGTTACTCCCAATGGGAACAGAGTTGACACAGGTCAATCAAAAGTATTGAAGGTTTTTAGAAGAGAGAGAAATCTCAAAGGTAACATTTCTGCGAAAAGTGAAACTGTTCCTTTAGAGCAACCTCGGATCTTGCTTGAAAAACGTAGTTCTGAAGGAATAGCTGATCAAGTTGGAAATGTAGCAGCAATGTCAGAAAGTGAGATGACGTCCTTGGGAAAGCCTTCAGAGGGGATATTTGGTTCATATGATGAATCAGATGACAATAATTATCAGACACCGTCACATTCTTTGCCAGAAGATTCTAAGTTCAAGAAACCCGGCATTGAAAATCGAAATTTTTCTCGATGGGAAGCAACGAGTGTGATCAAGGGTCAGAGGTCAAAAAGGAAGAGACCTTCGCCACTAATGAATAAAGCGCCTCTCCATGCTTCTGATGATTTAACGCATTCAGATCACGACACTCGAATCGATGAAATTGGGCACAAAGGAGTAGTGAGGGACATAATTAAAGGCACTTCAAAGCTATCTGTTGCATTAGATGATGGGAAAGTGAAGATGTTGGATCTCAACAAGCAAGGGTCCGATTTGTTCCTCAGAAGCACAAGAGATCTAAAGCATGGAAGGCTCGGTTTGTCTCTTTCCCTTGAAGAGACATTTGTATATTTGGCTAGCTTGTAG 2514 0.4236 MIRPRRSRTVIVNGSEANKFFLTNEFKLLKSSWPSSSVQLIGKDSIMKKDGERHRFLHGVIVTSFGHSGLETIVAKICNSVQLHISSNWHGQKMIHLYKSRRPLKILVQGFPRSLHTVAAKNGFLDDVVWLQEFLTSDSSLTVQVAVPKVLQPLPPPPGQLRSSVVGDAVDETASMQAKRVTLQRKGAAAMIAAEEYARRFEFGEDKSGNNTGEECSESDVRVFCRMCNCVENEGSDREKKMLSCKSCGKKYHRNCLRTWAQHRDLFRWTSWTCPACLICEFLYDKLLAEGPEIQVSSCSAKGAMVLTIAIVYNLLKRFSTNHLRDVYRDSELTPMVCCDICQRWVHCHCDNISDEKYHQFQVDGNLQYKCSACRRECYEVKNLKDAIQELWRRKDMADRDLIASLRAEAGLPTQEETFSISPYSDDDNSEPVKVKSESGRSLKFSLKTFCDNLPKKIKDRGKKHSSKRYAKEKDRQSFIPGKNDPHQIFEGNSDIEYLHSSGDDIKSQRNEVANVNSSLAAGFPVNQSGILKRKFIEEVSFSDEERKTRVLPITSNNKAHGVDREEETIENDKKTQNVKGKKSIINLTAQKTNMTSYPQSDALSCQKDQDMVTPNGNRVDTGQSKVLKVFRRERNLKGNISAKSETVPLEQPRILLEKRSSEGIADQVGNVAAMSESEMTSLGKPSEGIFGSYDESDDNNYQTPSHSLPEDSKFKKPGIENRNFSRWEATSVIKGQRSKRKRPSPLMNKAPLHASDDLTHSDHDTRIDEIGHKGVVRDIIKGTSKLSVALDDGKVKMLDLNKQGSDLFLRSTRDLKHGRLGLSLSLEETFVYLASL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0312 837 MobiDBLite consensus disorder prediction 678 718 - -
Lele10g0312 837 MobiDBLite consensus disorder prediction 457 487 - -
Lele10g0312 837 ProSiteProfiles Zinc finger PHD-type profile. 222 280 IPR019787 -
Lele10g0312 837 MobiDBLite consensus disorder prediction 734 764 - -
Lele10g0312 837 Gene3D Cytochrome P450 2 114 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele10g0312 837 MobiDBLite consensus disorder prediction 694 709 - -
Lele10g0312 837 Gene3D - 161 279 - -
Lele10g0312 837 MobiDBLite consensus disorder prediction 417 437 - -
Lele10g0312 837 SMART PHD_3 327 375 IPR001965 -
Lele10g0312 837 SMART PHD_3 224 278 IPR001965 -
Lele10g0312 837 ProSiteProfiles Zinc finger RING-type profile. 225 277 IPR001841 -
Lele10g0312 837 SUPERFAMILY Cytochrome P450 7 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele10g0312 837 ProSitePatterns Zinc finger PHD-type signature. 225 277 IPR019786 -
Lele10g0312 837 CDD PHD_SF 230 277 - -
Lele10g0312 837 SUPERFAMILY FYVE/PHD zinc finger 217 278 IPR011011 -
Lele10g0312 837 SUPERFAMILY FYVE/PHD zinc finger 334 381 IPR011011 -
Lele10g0312 837 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 325 378 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0312 Lele-ChrLele10 2058220 2065208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0312 3 108 Cytochrome P450 AT2G42850 47.170 7.57e-20 90.9