Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0290 ATGGGTCTGTGTACTTCAAAGCCCTCAGCGAATCTTTCACCTGCGTCTCCCAAATTCGAAACTGAATCGCCCAGGAATAACCAGGTACCACCTAGAGACGACTCTGTGCCTGTCATTGACTGTCCTCAACCTTATTCTAGCACTGTGAACGGAGAAAACTCTAGCAAGGAGAAGAAAGAGGCGGAGAATGGTAAAAGATCTCCTTTCTTCCCGTTTTACAGCCCAAGTCCGGCCCACTATTTGTTCTCCAAGAAGTCTCCGGCGAATGGGAGATCGAACTCCACGCTGAGGAGGTTCTTCAAACGCCCGTTCCCACCTCCGTCGCCGGCGAAGCACATAAAAGCTGTGTTGGCCAGGCGGCATGGGTCGGTGAAGCCGAATGAGGCGACAATACAAGGAGGGAGTGAAGCAAAGGTGGGTGCTGGCCTTGATAAGAGTTTTGGATTCTCAAAGCATTTCGGGAACAAGTATGAATTAGGAGATGAGGTTGGTAGAGGCCACTTTGGGTATACTTGTGTTGCCAAGTTTAAGAAGGGCGAGCTCAAGGGGCAACAAGTGGCTGTGAAAGTTATCCCGAAAGCCAAGATGACCACTGCCATTGCATTTGAGGATGTGAGAAGAGAAGTAAAAATATTGAGAGCTTTAACAGGGCATAAGAATCTTGTACAATTCTATGATGCATACGAAGACCAGGATAATGTCTATGTAGTAATGGAGTTGTATTTTGTAAAACCAGATGAAAGGCTTAATGATATAGTTGGCAATGTTGGACAAGCCAATTATAGTGCAACAAAGGCAGGAGTAATTGGCCTGACGAAAACTGTTGCAAGGGAATATGCAAGCAGAAATATCAATGTCAACGCTGTTGCCCCAGGAGACGAAGGGGTTGATGAACAGTGGTGGGATGGAAAAACTGAGCTTTACCTGCAATGGCCAATGAGGTTGATGGACACTCGTAAGATTTTGAAGCAGCCAAATTACAGGGACGTGTCTAGCTGCAACACCTACAACTATGGCGACTCGGTCTATTGGGACGCTCGCTATATGCAAGAGGGTTGCTCATTCGACTGGTACCAGCGTTATGCCGCTCTAAGGCCTTTCGTTCGTAAATACATCCCTCCCTCTTCTCGAGTTCTCATGGTTGGTTGTGGCAATGCCGTTATGTCAGAGGACATGGTCAAAGATGGTTATGAGGACATAATGAATATCGATATTTCAGCAGTCGCTATTGACATGATGAGAAAAAAATATGAGTACATCCCGCAGCTGAAATACATGCAGATGGATGTCAGGGATATGAGCTTCTTTCCTGATGATTCATTTGATGGTGTAATTGACAAAGGAACTCTTGATTCATTGATGTGTGGTACTGATGCTCCGATTAGCGCTGCTCAGATGCTTGCAGAAACTTCTAAAACCGGGAGGGACTTACTTCTTGGTAATCTTACTTCCATGGATGAAGCTTTAGTTTTATTATCACTTTATAGTGTATTCTCTATGTTCAGAGGACACAATTTATTGTTTAATTGCCATGTGCAGATTACGTACGGTGATCCAACCGTAAGGATGCCTCATCTAAGACGACCGATGTATAATTGGAGAGTTACATTGTATAATATCCCTAGACCTGGATTTCAAAAGCCAGAAAGTTGTAGTTCATCAAGGAAATCATTTTTGGAACCGATTCCTCTAGATGAGAAGGGATTGATTCCAAAAGATTGGGTTTTGGAAGATCCGGAATCTCACTATATATATGTTTGTAGAAAGATGGACGACGCTGAGATAGACGATCTACCGACCTACCAGTTAACGGCCGATGTTTTATAG 1827 0.4433 MGLCTSKPSANLSPASPKFETESPRNNQVPPRDDSVPVIDCPQPYSSTVNGENSSKEKKEAENGKRSPFFPFYSPSPAHYLFSKKSPANGRSNSTLRRFFKRPFPPPSPAKHIKAVLARRHGSVKPNEATIQGGSEAKVGAGLDKSFGFSKHFGNKYELGDEVGRGHFGYTCVAKFKKGELKGQQVAVKVIPKAKMTTAIAFEDVRREVKILRALTGHKNLVQFYDAYEDQDNVYVVMELYFVKPDERLNDIVGNVGQANYSATKAGVIGLTKTVAREYASRNINVNAVAPGDEGVDEQWWDGKTELYLQWPMRLMDTRKILKQPNYRDVSSCNTYNYGDSVYWDARYMQEGCSFDWYQRYAALRPFVRKYIPPSSRVLMVGCGNAVMSEDMVKDGYEDIMNIDISAVAIDMMRKKYEYIPQLKYMQMDVRDMSFFPDDSFDGVIDKGTLDSLMCGTDAPISAAQMLAETSKTGRDLLLGNLTSMDEALVLLSLYSVFSMFRGHNLLFNCHVQITYGDPTVRMPHLRRPMYNWRVTLYNIPRPGFQKPESCSSSRKSFLEPIPLDEKGLIPKDWVLEDPESHYIYVCRKMDDAEIDDLPTYQLTADVL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0290 608 MobiDBLite consensus disorder prediction 1 30 - -
Lele10g0290 608 MobiDBLite consensus disorder prediction 1 69 - -
Lele10g0290 608 CDD AdoMet_MTases 377 479 - -
Lele10g0290 608 Pfam Protein kinase domain 157 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0290 608 Gene3D - 249 336 - -
Lele10g0290 608 ProSitePatterns Protein kinases ATP-binding region signature. 163 189 IPR017441 GO:0005524
Lele10g0290 608 Pfam short chain dehydrogenase 253 292 IPR002347 -
Lele10g0290 608 SMART serkin_6 157 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0290 608 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 252 320 IPR036291 -
Lele10g0290 608 FunFam CDPK-related kinase 1 150 242 - -
Lele10g0290 608 Gene3D Phosphorylase Kinase; domain 1 148 241 - -
Lele10g0290 608 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 336 466 IPR029063 -
Lele10g0290 608 SUPERFAMILY Protein kinase-like (PK-like) 148 241 IPR011009 -
Lele10g0290 608 Gene3D Vaccinia Virus protein VP39 337 595 IPR029063 -
Lele10g0290 608 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 335 590 - -
Lele10g0290 608 ProSiteProfiles Protein kinase domain profile. 157 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0290 608 Pfam Methyltransferase domain 378 451 IPR041698 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0290 Lele-ChrLele10 1925849 1934707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0290 1 276 EF-hand Containing Proteins AT3G50530 62.633 2.29e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele10g0290 Methyltransf_25 4.8e-10 CL0063