Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0285 ATGGGGTATTTCTCTTGCAGAGCTGAATCTGCCGTTTCAACGTCCAATTCTGTATCCCCATCTTCCTCCTCTGCTCAAAAACCTGAGAAACCCATTAAGATCCAACATTTCGACTATAGTGACCTCGAAGCCGCCACTAATGGCTTCTCCGACCGAAAGCTCCTAGGCAAAGGTAGCCATGGCTATGTCTACAAAGCCGTTGTTCGAGGCCGTCCCGTCGCCGTCAAGAGGCCATCGAGAGCTCACGGTGCTGTTCTTCGACGACCCAGTTCGTTGTCATCTTCTTCGTCGGCGCTGGAGATTACGAACGAGGTGGACAACGAGATCGACATCTTGTCGAAAATTCAGAGCCCGAGATTAGTCAATTTGGTGGGTTTCACGAACGATTCGAAAGATAGACTTCTGGTTGTGGAGTTCATGAGCAATGGAACCGTCTACGATGTTCTTCATTCTTCTGCACGACCACCCAACTGGGGTCGGAGAATCCGATTGGCTCTGCAAACTGCAAAAGCCATCGATACCCTCCATTCCTCAACGCCACCTGTAATTCACCGGGACATCAAATCTGCAAATGTTCTAATAGATCGAAACTTCAATGCTAGATTGGGAGATTTTGGGTTAGCCCTGCGAGGCCATGAAGATGACTATAGACTCAGGTCTACTCCTCCAGCAGGTACTATGGGATATCTTGATCCTTGTTATGTAACCCCAGATAACTTGAGTACAAAAACTGATGTTTTTAGTTTTGGGATTTTGCTGTTAGAGATAATTAGTGGTAGAAAAGCCATTGATATTACATATTCACCACCTTCCATTGTTGATTGGGCAATTCCTCTCATAAAGAAAGGGAAGTTATTGGCTGTTTATGATCCAAGGATTTTAACTCCTAAGGATCCAGTTGTTAGGAAGCAATTGGCTGTGATTGCTGCAAAATGTGTAAGGTCTTGCAGAGAAAGAAGACCTTCAATGAAGGAGATAGTTGCTTGGCTTACGGGTTTATGTAAACTGGTTCCTCTTCATTCGTGGAATGGTTTTAACAACCCCTGTATGATGATTGAGACTGTGGGACGCCCAATTGAAGCCAGAAATACCCATATGAGTCCAAGACAAGAAGAACAAGGTTTAGAAGGTGGAAATTTTGAAGCTTTAGAAGCTAGATTGTCTAAATCTGCAAATAGATATTCACGGAGAGTGTATTCTGATCTGGGTTTCAGAAGCAACTTGATGGAACTTATGAACGACCCTGAGGAACCAGATAAATCTGGTTATAGAGTTTCTAGTTCAAGGTTTGGTAGTGGGAGATATTTCACAAGAGGCATAAATCTTTACAGGGCTTGTGGTACAGATAAAGATGCTTTTGGTTTGAGTGAAGGCCAAATTGTTGTTGTTGGTGGTGGTGATGGGAGCTCAAATTTGTGTCCAAAACAAGAAGGTAATTCTGGATCAGATTTGAATTCTCAAGCAGCTGAAGCTAATAATTCCTAG 1485 0.4357 MGYFSCRAESAVSTSNSVSPSSSSAQKPEKPIKIQHFDYSDLEAATNGFSDRKLLGKGSHGYVYKAVVRGRPVAVKRPSRAHGAVLRRPSSLSSSSSALEITNEVDNEIDILSKIQSPRLVNLVGFTNDSKDRLLVVEFMSNGTVYDVLHSSARPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHEDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRILTPKDPVVRKQLAVIAAKCVRSCRERRPSMKEIVAWLTGLCKLVPLHSWNGFNNPCMMIETVGRPIEARNTHMSPRQEEQGLEGGNFEALEARLSKSANRYSRRVYSDLGFRSNLMELMNDPEEPDKSGYRVSSSRFGSGRYFTRGINLYRACGTDKDAFGLSEGQIVVVGGGDGSSNLCPKQEGNSGSDLNSQAAEANNS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0285 494 MobiDBLite consensus disorder prediction 8 29 - -
Lele10g0285 494 MobiDBLite consensus disorder prediction 1 30 - -
Lele10g0285 494 Gene3D Transferase(Phosphotransferase) domain 1 140 338 - -
Lele10g0285 494 MobiDBLite consensus disorder prediction 472 494 - -
Lele10g0285 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Lele10g0285 494 PANTHER OS01G0253100 PROTEIN 21 333 IPR045271 -
Lele10g0285 494 Pfam Protein tyrosine and serine/threonine kinase 53 328 IPR001245 GO:0004672|GO:0006468
Lele10g0285 494 Gene3D Phosphorylase Kinase; domain 1 29 139 - -
Lele10g0285 494 SUPERFAMILY Protein kinase-like (PK-like) 23 330 IPR011009 -
Lele10g0285 494 ProSiteProfiles Protein kinase domain profile. 49 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0285 494 ProSitePatterns Protein kinases ATP-binding region signature. 55 76 IPR017441 GO:0005524
Lele10g0285 494 SMART serkin_6 49 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0285 494 Coils Coil 484 494 - -
Lele10g0285 494 MobiDBLite consensus disorder prediction 466 494 - -
Lele10g0285 494 FunFam Serine/threonine-protein kinase-like protein 140 343 - -
Lele10g0285 494 FunFam Serine/threonine-protein kinase-like protein At1g28390 19 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0285 Lele-ChrLele10 1897081 1898565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0285 37 330 Receptor kinase-like Gene Family AT3G59420 43.667 2.62e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele10g0285 Pkinase 8.8e-36 CL0016