Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0279 ATGGAGCAGTACCTCAGAGAGAACTTCGATGTCTCTTCCAAGCGGCCCTCCGAGGCAGCCCTCCTCCGATGGAGATCTGCCGTCGCCATTGTTAAGAATCCCCGCCGCCGCTTTCGCATGGTCGCGGACCTCGCCAAGCGCGCTGAGGCTGAGAAGAAACGCAAGAACCTCCAGGAAAAAGTACGAGTAGCCCTCTATGTGCAAAAAGCAGCATTGCAGTTTATTGACGCCGGACAGCGTGGTGCGTCGACCACGCTCTCCAGAGAGGTTAGAGAATCAGGTTATGCTGTTGAGCCCGACGAATTAGCATCCCTATGCCGATCACACGATAAAAAATCCTTAGAACATAGTGGAGGAGTAGAAGGTTTGGCAAAAGCAGTTAATGTGTCACTGAAAGACGGTGTTAAGTCAAGTAATGTTCCTCATAGACAAAGCATCTTCGGTTCTAACCGCTTTGCTGAGAAGCCCTCAAGAGGATTTTGGATGTTCGTTTGGGATGCAATGCAAGACATGACTCTCATTATCCTTTTGTTCTGTGCTCTTGTTTCAATAGGAGTTGGAATCCCAACCGAAGGTTTCCCAAAAGGTATATATGATGGAGTTGGAATCGCACTCTCTATTCTCTTAGTCGTCTTCGTAACTTCAGTTAGTGACTATAAACAGTCTTTGCAATTCAAAGATTTGGAAAATGAGAAAAAGAATGTTACCATTCAAGTCACTAGAGATGGGAACAGACAAAAGGTTTCAATCTATGAGTTAGTGGTAGGAGATATTGTTCATTTATCAATTGGAGACGTAGTTCCTGCAGATGGCGTATTCATATCAGGTTACAGCTTATTAATTGATGAATCAAGCTTATCAGGGGAGAGCGAAGCTGTGAATGTCGACCAAAATGCTCCTTTTCTTCTAGCTGGGACCAAAGTACAAGATGGATCTGCTAAGATGCTTGTGACTTCTGTTGGTATGAGAACTGAATGGGGAAGATTGATGGATACTCTGAACGAAGTGGGAGACGATGAGACGCCGTTGCAGGTTAAACTGAATGGGGTTGCAACCATAATTGGAAAGATTGGCTTGGTTTTTGCCCTGATGACATTCTTGGTTCTAACTGGCAGGTTTTTGGTACGTAAAATAGTTCATAATGAAATCACTCAATGGTCCTTACACGACGCATCTGAGCTTCTCAATTTCTTTGCAACTGCTGTGATTATAATAGTTGTGGCAGTTCCAGAGGGGCTTCCTTTGGCAGTGACGCTAAGCCTTGCGTTTGCAATGAAGAAGTTAATGAACGATAAGGCACTTGTCAGGTACCTTTCTGCATGCGAGACGATGGGCTCAGCTGGTTGTATTTGCACGGACAAAACAGGAACTTTGACAACAAACCACATGGTTGTGCATAAAATATGGATTTGTGGACAAACTAAGGAGATAAAAACTAATGACAGTGAGAATAATTTGTTAAAGTCGTTGGTTTCTCAACAAATATTTGACCTCTTTTTGCAGTCAATATTTCAGAATACTAGCTCGGAGGTTGTCAAAGGTGAAAATGGGAACATTAAGGTTATGGGTACTCCGACAGAGAAGGCATTGCTGGAATTTGGGTTGCTTGCTGGAGGTGAACCTAAGGTTTATAATGACAAGATCTTAAAGGTCGAACCATTCAATTCGAACAGAAAAAGAATGTCGGTACTAGTGTCTCTTCCTGGTACTGCCAATTATAGGTCGAGAGCATTCTGTAAAGGAGCATCAGAAATAGTTCTGGAAATGTGCGACAAAATTGTGGATTCAAATGGCAAAGTCGTTCGTCTGTTCGAAGAACAAAGAAGGAACGTCAAGAAAGTTATCAATGATTTTGCTTCTGAAGCTCTAAGAACTCTCTCTATCGCCTTTAACGATATAGAAGGAACTATTACTGATATTCCAAAGGAGAATTTTACATTGTTGGCTATTGTTGGGATCAAGGATCCTGTGAGGCCTGGAGTAAAAGAAGCTGTAGAAATTTGTAAAGCAGCTGATATTTCAGTAAAGATGGTGACTGGTGATAATATAATTACTGCTAAAGCAATAGCTAGAGAATGTGGTATCTTGACAGATGGGATAGCCATCGAAGGACCCGAATTCCGTAGGAAGAACCAGCAAGAAATGGAGGAGATAATACCAAGAATACAGGTTATGGCTCGATCGTTGCCTCTGGACAAGCACACTTTAGTGACCCATTTGAGGAAGGACTTCGATGAAGTTGTTGCAGTAACTGGTGATGGGACCAACGATGCTCCAGCATTGCGTGAGGCGGATATTGGCCTCGCTATGGGCATAGCAGGAACTGAGGTCGCAAAAGAAAATGCGGATGTCATTGTTATGGATGATAACTTCATAACCATACTGAATGTTGCCAGATGGGGCCGTTCTGTCTACATCAATGTTCAGAAGTTTGTTCAATTCCAATTAACAGTTAATGTTGTGGCTCTTATCCTCAATTTTGTTTCCGCCTGTGTGTCAGGTTCTGCCCCTCTTACCGCTGTTCAAATGCTTTGGAGCCTCTATCAAATAGTTGTCCTTTTGGTTCTCAAATTTCGTGGTAAACAGATTTTGAAGCTTATTAATCATGATGCAACCTCTGTTCTGAATACTCTCATATTCAACGTCTTCGTATTTTGCCAGGTATTCAACGAGATAAACAGTCGTGACATGGAGAAGATCAATGTTTTCCGAGGCATGTTCAGCAGTTGGATCTTCCTCGGAGTTTTGGCCTCAACAATATTTTTCCAAGTCATACTTGTTGAATTTCTGGGTACTTTTGCTCAAACAGTACCACTTTGCTGGGACCTATGGCTAGCCAGTGTCATAATTGGTGCAGTGAGCTTACCCTTAGCTGCCATTGTCAAATGCATTCCCGTTCCAGTGGCTCGTTACATGGACCGCCATCATCATCCTGATTACGTACCTATCCCAAGTGGCCCAGAGATGGCATGA 2973 0.4302 MEQYLRENFDVSSKRPSEAALLRWRSAVAIVKNPRRRFRMVADLAKRAEAEKKRKNLQEKVRVALYVQKAALQFIDAGQRGASTTLSREVRESGYAVEPDELASLCRSHDKKSLEHSGGVEGLAKAVNVSLKDGVKSSNVPHRQSIFGSNRFAEKPSRGFWMFVWDAMQDMTLIILLFCALVSIGVGIPTEGFPKGIYDGVGIALSILLVVFVTSVSDYKQSLQFKDLENEKKNVTIQVTRDGNRQKVSIYELVVGDIVHLSIGDVVPADGVFISGYSLLIDESSLSGESEAVNVDQNAPFLLAGTKVQDGSAKMLVTSVGMRTEWGRLMDTLNEVGDDETPLQVKLNGVATIIGKIGLVFALMTFLVLTGRFLVRKIVHNEITQWSLHDASELLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRYLSACETMGSAGCICTDKTGTLTTNHMVVHKIWICGQTKEIKTNDSENNLLKSLVSQQIFDLFLQSIFQNTSSEVVKGENGNIKVMGTPTEKALLEFGLLAGGEPKVYNDKILKVEPFNSNRKRMSVLVSLPGTANYRSRAFCKGASEIVLEMCDKIVDSNGKVVRLFEEQRRNVKKVINDFASEALRTLSIAFNDIEGTITDIPKENFTLLAIVGIKDPVRPGVKEAVEICKAADISVKMVTGDNIITAKAIARECGILTDGIAIEGPEFRRKNQQEMEEIIPRIQVMARSLPLDKHTLVTHLRKDFDEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKENADVIVMDDNFITILNVARWGRSVYINVQKFVQFQLTVNVVALILNFVSACVSGSAPLTAVQMLWSLYQIVVLLVLKFRGKQILKLINHDATSVLNTLIFNVFVFCQVFNEINSRDMEKINVFRGMFSSWIFLGVLASTIFFQVILVEFLGTFAQTVPLCWDLWLASVIIGAVSLPLAAIVKCIPVPVARYMDRHHHPDYVPIPSGPEMA 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0279 990 SFLD p-type atpase 433 803 IPR044492 -
Lele10g0279 990 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Lele10g0279 990 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Lele10g0279 990 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele10g0279 990 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele10g0279 990 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele10g0279 990 Pfam Cation transporter/ATPase, N-terminus 115 183 IPR004014 -
Lele10g0279 990 PANTHER CATION TRANSPORTING ATPASE 846 966 - -
Lele10g0279 990 Pfam haloacid dehalogenase-like hydrolase 449 765 - -
Lele10g0279 990 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 661 IPR023299 GO:0000166
Lele10g0279 990 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 107 845 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele10g0279 990 FunFam Calcium-transporting ATPase 212 334 - -
Lele10g0279 990 Gene3D - 461 656 IPR023299 GO:0000166
Lele10g0279 990 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 713 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele10g0279 990 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 203 528 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele10g0279 990 Coils Coil 40 60 - -
Lele10g0279 990 Pfam E1-E2 ATPase 236 429 - -
Lele10g0279 990 SFLD C1.7: P-type atpase like 433 803 - -
Lele10g0279 990 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Lele10g0279 990 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Lele10g0279 990 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Lele10g0279 990 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Lele10g0279 990 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Lele10g0279 990 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Lele10g0279 990 FunFam Calcium-transporting ATPase 16 76 - -
Lele10g0279 990 SUPERFAMILY Calcium ATPase, transduction domain A 235 332 IPR008250 -
Lele10g0279 990 SMART Cation_ATPase_N_a_2 114 188 IPR004014 -
Lele10g0279 990 Pfam Cation transporting ATPase, C-terminus 843 963 IPR006068 -
Lele10g0279 990 FunFam Calcium-transporting ATPase 461 656 - -
Lele10g0279 990 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 966 IPR023298 -
Lele10g0279 990 Gene3D - 16 77 - -
Lele10g0279 990 Gene3D - 857 969 - -
Lele10g0279 990 Gene3D - 134 334 - -
Lele10g0279 990 SUPERFAMILY HAD-like 450 854 IPR036412 -
Lele10g0279 990 FunFam Calcium-transporting ATPase 650 796 - -
Lele10g0279 990 Gene3D - 448 796 IPR023214 -
Lele10g0279 990 Gene3D - 166 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0279 Lele-ChrLele10 1846247 1853134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0279 57 987 Primary Pumps ATPases AT3G57330 63.405 0.0 1238