Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0258 ATGGGTTACTCCAAGGAACAAGTTGTTAGCTCATTCACTGATGTTTCTAGAAGCCACCCAGATAAGGATGTTTCATCTTTGTGGCCGGCTGTTTTATGTCATCTTAGAGAGGAGCAAGTCTATGGTTTACAGGAGGAATCTCAAACCATGAGAAACAATTTCTGCGTGACAAGTTCTATTTCTGTCTCAAGCGGTTCGATTGATCTCACTGGAAATGAGAGCAGATCTGTCAGTGCATCTTGTGGGAACATGCTGAGCTTTAGGTCTCCTGAACCTGATACATCTTTTGCCTTGAGGGCCTGTTCATCATCTGACCATGCAATGCCAATATCAATGGTGAACAGTTTAAGTTTACCACCATTGAGCTTGGGGGAGAGGTTTGAAGATGCATATGAAGTGATTTTAATATTGGATGATCGGGAGCAATTTGCCACTCAGGGATCCCGATCCAGGAGAATTATTGAGAATATCCGCAGTCAATTCAAAATCCAAATAGATGTTCGGAGATTGCCTGTTGGAGATGGGATTTGGATAGCTCACCATAAAACTCTTGACAGTGAATATGTGCTGGATTTTATTGTTGAGAGGAAGAATGTTGATGATTTGCGTTCTTCAATCAGGGATAACCGTTATAAGGATCAAAAACTAAGACTTTTGAGGTGTGGACTGAACAAGCTGATATATCTTGTGGAAGGTGATCCAAATTCCTCTGAAGCTGCTGAAAGCATAAAAACTGCCTGTTTTACAACAGAGATTTTGGAGGGTTTTGATGTGCAGAGAACAAGTGGTTTGGCTGATACACTAAAGAAGTATGGTTATCTTACCCAAGCAATTTCTCAATATTATAAGACAATAGTTCTGGATGACCATGTTAAGTGCTCTGGAACATGCCCTCCTTTTGATGAATTTGTCAAAAGGTGCCAATATCTTGACAAAATGACAGTCAGTGATGTATTTGCTGTCCAGCTTATGCAGGTCCCTCAGGTTACAGAGGAGATTGCCCTGGCTGTGCTGGATTTGTACCCCACACTTCTCTCTCTTGCCAAAGCCTACTCTCTTCTTAATGGAGATGTTTGTGCACAAGAGGACATGCTCAGAAAACAGAGCAATAATGTGATCAATGCTGTTGCCAGTAGGAACATTTTCCAGTTAGTTTGGGGTAGCTGA 1167 0.4165 MGYSKEQVVSSFTDVSRSHPDKDVSSLWPAVLCHLREEQVYGLQEESQTMRNNFCVTSSISVSSGSIDLTGNESRSVSASCGNMLSFRSPEPDTSFALRACSSSDHAMPISMVNSLSLPPLSLGERFEDAYEVILILDDREQFATQGSRSRRIIENIRSQFKIQIDVRRLPVGDGIWIAHHKTLDSEYVLDFIVERKNVDDLRSSIRDNRYKDQKLRLLRCGLNKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLADTLKKYGYLTQAISQYYKTIVLDDHVKCSGTCPPFDEFVKRCQYLDKMTVSDVFAVQLMQVPQVTEEIALAVLDLYPTLLSLAKAYSLLNGDVCAQEDMLRKQSNNVINAVASRNIFQLVWGS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0258 388 SMART ERCC4_2 134 234 IPR006166 GO:0003677|GO:0004518
Lele10g0258 388 Gene3D - 127 277 - -
Lele10g0258 388 Gene3D - 313 388 IPR042530 -
Lele10g0258 388 SUPERFAMILY Restriction endonuclease-like 131 277 IPR011335 -
Lele10g0258 388 PANTHER CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81 2 388 IPR033309 GO:0000737|GO:0006302|GO:0008821
Lele10g0258 388 MobiDBLite consensus disorder prediction 1 21 - -
Lele10g0258 388 Pfam ERCC4 domain 138 268 IPR006166 GO:0003677|GO:0004518
Lele10g0258 388 FunFam crossover junction endonuclease MUS81 isoform X1 129 277 - -
Lele10g0258 388 MobiDBLite consensus disorder prediction 1 15 - -
Lele10g0258 388 FunFam Crossover junction endonuclease MUS81 313 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0258 Lele-ChrLele10 1705327 1709155 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0258 10 1705327 1709155 Lele11g0267 11 2854377 2860773 hybridization
Lele10g0258 10 1705327 1709155 Lele12g1008 12 17686245 17692679 hybridization