Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0255 ATGCAATACCTCATTGACATGGAAGTGGAAGACCAGGCCTTAGTTCATCTACTGATGACTTGTGCTAAGTATACAGAAGATGGTGAGTTCAACAAGGCAGGTTCTGGACTCGACTCCATTGCTAGTTTTGTCACCGCTGATGGTGATCAGATGCAGAGAATAGCTACTTATGTTCTTGAAGGGCTTGCTTACAGGTTGGTCAAGAATATTCGTGGTGTTCCTGAAGCTCTAAATCTGTCAAGTCCCATATCAACGTTAGCACAGCAACATGCCAGAAAGTTGTTCTCTGAGCTCTGTCCATTCTTGAAGTTCTCTTATATGATCACCAACCAAGCTATTGTTGAAGCCATGAGAGGTGAACAAGTTATTCATATTATGGATCTCAATGCTTGTGATGCTGCTCAATGGATATATCTTCTTCATACTTTGAAAGAAAAATGGCACGGAAGTCATCAAGTACCTTATGTGAAGATCACTGGGATTCATGAGGATAAAAGGGTTTTGGAAAAAACGAGGATTCAATTGATTCAAGAAGCTGAGAAAATGGAAATTCCCTTCAACTTCTATATCATCGAGAGCCCATTGGAGGAACTTTGCTTTGCGAATTTACCAGTGAAGCCAGGAGAGCCCCTCGCTATAAGTTCTGTTCTTCAGCTACATTATCTTCTTGCAGTTGACGATCAAATCAGTCCTGATTCAGTCTTGCCAACGAATCCTTCGCAGTTCGATTCACCTAAGATGAGGTCTTTTCTAAGTAGTGTTTGGAAACTCAAACCTAGGTTGATGGTGATTACAGAACAAGAATCAGATAATAATGAGACTTCATTAACTGAGAGGCTTGATAAGGCACTGAAGTTCTATGGTGCATTGTTTGATTGCTTGGAATCTAAAGTTCCAAAAGAAAGAGCAATAGAGAGAATAATGGTGGAGAGGATGCTTCTTGGGGAAGAGATAAAGAACATTATTTCATGTGATGGGATTGACAGAAAAATGAGGCATGGCAAGTTTTATAACACATGGAATCCATGGCTTGAATTGGCTGGATTTAAGAGAGTGCCACTTCACTATGAGAGAATGTTGCAGGTAACAAGGCCATTGCAGAGCTATGGCCATGGATACAAGTTACTATCAGATTCAAATCAATGTATCTTTACTTGCTGGAATGATCTTCCACTCTATTCTATTTCAGCATGGAGGTTCCTGTGA 1206 0.4038 MQYLIDMEVEDQALVHLLMTCAKYTEDGEFNKAGSGLDSIASFVTADGDQMQRIATYVLEGLAYRLVKNIRGVPEALNLSSPISTLAQQHARKLFSELCPFLKFSYMITNQAIVEAMRGEQVIHIMDLNACDAAQWIYLLHTLKEKWHGSHQVPYVKITGIHEDKRVLEKTRIQLIQEAEKMEIPFNFYIIESPLEELCFANLPVKPGEPLAISSVLQLHYLLAVDDQISPDSVLPTNPSQFDSPKMRSFLSSVWKLKPRLMVITEQESDNNETSLTERLDKALKFYGALFDCLESKVPKERAIERIMVERMLLGEEIKNIISCDGIDRKMRHGKFYNTWNPWLELAGFKRVPLHYERMLQVTRPLQSYGHGYKLLSDSNQCIFTCWNDLPLYSISAWRFL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0255 401 Pfam GRAS domain family 14 399 IPR005202 -
Lele10g0255 401 ProSiteProfiles GRAS family profile. 5 399 IPR005202 -
Lele10g0255 401 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 394 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0255 Lele-ChrLele10 1688240 1689445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0255 4 399 GRAS Transcription Factor Family AT1G50420 42.342 6.49e-112 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele10g0255 GRAS 1.5e-99 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0255 10 1688240 1689445 Lele11g0265 11 2836171 2840565 hybridization
Lele10g0255 10 1688240 1689445 Lele12g1010 12 17702697 17705858 hybridization