Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0254 ATGAAAGTAGAATGCAGGGGCTTCTACCTACCTCGTCTCCTTGGAACGTGTGCTAGGTATACTGAAGTTCGTGACTTTCACAATGCAAGTGAAGCAATCGAGAACATTGCTAGTGTTGCCTGCACTGATGGTGATCCGATGCAGAGAGTAGCAAGTTACTTAAATAAGGGACTTGCTTGCAGGTTAGTGAAGAATATTCGTGGTGTGCCTGAAGCCTTAGATCTGTCAAATCCCTTGCCAAGCTTAGTGCAACAGTATACAAGAAAGTTGTTCTTTGACTTTCTCCCATTCTTGAAGTTTTCTTATCTCATCACCAATCAGGCTATTGTTGACACCATGCAAAGAGAACAAGTGTTTCATATTATTGATCTTAATGCCTGTGATGCTACTCAATGGATATATCTTCTTCATACGCTGAAGGAACAACACCAGGGAGAGCAACTACCTTTCCTGAAGATTACTGGGATTAATCAGGACAAAGATATTTTGGAACAAATAGGGTTTCAATTGATTCAAGAAGCACAGAAACTGAACATATCCTTCCACTTCTATCCAATTGTAAGCCAATTGGAGAATCTTTGCTTTGAGAAATTGCCTTTGAAGCCAGGAGAGCCACTTGCTATAAGTTCAGTTCTTCATCTTCATTCTCTTCTGGCAGTTGATGATCAAATCAGTCCTGATTCAGTCTTGCCACATGATCCTTTGGCTTCGCAATTTGTTTCACCAAAGATGAAGAGGTTTCTAAATAGCCTTTGGAAACTTCAACCGAGGTTGATGGTCATTACAGAACAAGAATCAGATAACAATGGACCTTCTCTGACAGACAGGCTTGATAAGGCACTGAACTTCTACGCTGCACTGTTCGATTGCTTGGAGGCTACTGTTCCAAGAGCAAAAGCAGCAGAGAGAATCATGCTTGAAAAGATGCTTTTCGGGGAGGAGATAAAGAACATCGTTGCTTGTGACGGAGTTGATAGAAAAGAAAGGCGTGGTAAGTTTCTGAAGACATGGAGACCATCGCTTGAATTGGCCGGCTTCATGAGGGTTCCTATGGACTATGGGAGAATGTTGCAGCCTGGAGATTCTAAGGGAAAAGTTCAGCTTTATGTTAAGCATGATGAAGTATCAATGGCATTGTTTGATTTGAGTTTTGTTAATAATATACAAATTTCAAGCTCAAGCTCAAGCTCAACATACCAATGGCTCACAGAAATGGGATGGGAAGCGAAGGGCATTTTAATTGCCAGTCTTCTTCCCCACTGTGCTAAACTTACCGAAACCGGCGATGTCATGAACGTCGTAAGCACCCTCCAGAAAATCGTCAATCTCGCCCGCCCCGATGACGACGCCCTTCAGCGCGTCGCCCCGTACGCCAACGAAGGCCTGGCTCATCGGATGCTCAACAAGTACATACCCGGACTGTCGGAATCGCTCCGTCTGACGAATCGCTTGTCGGCATCGGAGCTAGTGCTTGTCCGTAGGCTCTTCCGAGAGTTGTTTCCCTTCTTGATGTTCTCATACTGGATCTCGAATCAAGCCATCGCTGAAGCCATGAGAGGCGAATCGGTGATTCATGTCATCGATTTCAACGCTTCCGATCCAGAACAGTGGATCCATCTTCTTCATACATTGAAGGATCTGTATCAAGCGGATAATCGGCCTCTTCCGTTACTGAAATCACGGGAATTCATGAGAAGAAGGAGGTTCTGGAAAAGACGGGGTTTCAATTGA 1731 0.4419 MKVECRGFYLPRLLGTCARYTEVRDFHNASEAIENIASVACTDGDPMQRVASYLNKGLACRLVKNIRGVPEALDLSNPLPSLVQQYTRKLFFDFLPFLKFSYLITNQAIVDTMQREQVFHIIDLNACDATQWIYLLHTLKEQHQGEQLPFLKITGINQDKDILEQIGFQLIQEAQKLNISFHFYPIVSQLENLCFEKLPLKPGEPLAISSVLHLHSLLAVDDQISPDSVLPHDPLASQFVSPKMKRFLNSLWKLQPRLMVITEQESDNNGPSLTDRLDKALNFYAALFDCLEATVPRAKAAERIMLEKMLFGEEIKNIVACDGVDRKERRGKFLKTWRPSLELAGFMRVPMDYGRMLQPGDSKGKVQLYVKHDEVSMALFDLSFVNNIQISSSSSSSTYQWLTEMGWEAKGILIASLLPHCAKLTETGDVMNVVSTLQKIVNLARPDDDALQRVAPYANEGLAHRMLNKYIPGLSESLRLTNRLSASELVLVRRLFRELFPFLMFSYWISNQAIAEAMRGESVIHVIDFNASDPEQWIHLLHTLKDLYQADNRPLPLLKSREFMRRRRFWKRRGFN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0254 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 413 545 IPR005202 -
Lele10g0254 576 Pfam GRAS domain family 416 546 IPR005202 -
Lele10g0254 576 Pfam GRAS domain family 12 358 IPR005202 -
Lele10g0254 576 ProSiteProfiles GRAS family profile. 405 576 IPR005202 -
Lele10g0254 576 ProSiteProfiles GRAS family profile. 1 400 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0254 Lele-ChrLele10 1680994 1684959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0254 394 544 GRAS Transcription Factor Family AT1G50420 41.830 2.72e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele10g0254 GRAS 2.7e-83 CL0063