Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0234 ATGGCGACTCTAGTTTTCCCAAACGAGCACTCTCCTGTTGAAGATGCTGACTCCATCCACAAGTCCTTTGAAGGATGGGGAACTGATGAGAAGAGCATAATAACAATCCTGGGTCACAGAAACACTCACCAGAGGCAGCAAATCAGAAAGGCTTATGAGGAACTTTTCCAGGAAGATCTTGTCAAACGCCTTGAGAAGGAGATCTCCGGTGACTTTGAGAGGGCTGTGTATCGGTGGATTCTGGAACCGGCGGATCGTGATGCAGTGTTGGCCCATGTGGTCATCAAGGATGGGAAGAACTACAATGTGATTGCAGAGATTGCCACAGTGCTTTCCCCTGAAGAGCTGCTTGCTGTGAGGCGTGCCTACCTTCATCGCTACAAGCACTCCTTGGAAGAAGATGTGGCTGCTACTACTTCAGGCCATCTTCGCCAGCTTTTGGTAGGGTTGGTGACCTCATACAGGTATGTTGGAGAAGAGATCAATGCAAGATTGGCACAATCTGAAGCTGAGATCCTTCATGAGGCTATCAAGGAGAAGAAAGGAAGCGAGGAAGAAGTCATTAGGATATTGACCACAAGGAGCAAGACCCAACTTGTTGCAACCTTCAATCGCTACAGGGAGGCCCATGGAGTGTCCATCTCTAAGAAATTGGTGGATGAGACATCAGATGAGTTCCATAGGGCATTGTACACGGCCATCCGCTGCTTCAATGACCACACCAAGTACTACGAAAAGGTGGTGCGCAATGCAATACAGAAGAGGGGAACTGATGAGGATGCACTGACCCGTGTGATCGTGAGCAGGGCAGAAAAGGACATGAGGGAAATCAAAGAACTGTATTACAAGAGGAACAGTGTTCATCTTGAACAAGCTGTGGCCAAGGAGATCTCAGGAGACTACAAGAACTTCCTGCTCACTCTCTTGGGGAAGGAAGATTAA 942 0.483 MATLVFPNEHSPVEDADSIHKSFEGWGTDEKSIITILGHRNTHQRQQIRKAYEELFQEDLVKRLEKEISGDFERAVYRWILEPADRDAVLAHVVIKDGKNYNVIAEIATVLSPEELLAVRRAYLHRYKHSLEEDVAATTSGHLRQLLVGLVTSYRYVGEEINARLAQSEAEILHEAIKEKKGSEEEVIRILTTRSKTQLVATFNRYREAHGVSISKKLVDETSDEFHRALYTAIRCFNDHTKYYEKVVRNAIQKRGTDEDALTRVIVSRAEKDMREIKELYYKRNSVHLEQAVAKEISGDYKNFLLTLLGKED 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0234 313 FunFam Annexin 240 311 - -
Lele10g0234 313 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 Gene3D Annexin 164 237 IPR037104 GO:0005509|GO:0005544
Lele10g0234 313 FunFam Annexin 82 151 - -
Lele10g0234 313 Gene3D Annexin 241 311 IPR037104 GO:0005509|GO:0005544
Lele10g0234 313 PRINTS Annexin family signature 172 198 IPR001464 GO:0005509|GO:0005544
Lele10g0234 313 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Lele10g0234 313 PRINTS Annexin family signature 296 309 IPR001464 GO:0005509|GO:0005544
Lele10g0234 313 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Lele10g0234 313 PRINTS Annexin family signature 252 272 IPR001464 GO:0005509|GO:0005544
Lele10g0234 313 PRINTS Plant annexin signature 159 179 IPR009118 -
Lele10g0234 313 PRINTS Plant annexin signature 117 131 IPR009118 -
Lele10g0234 313 PRINTS Plant annexin signature 224 242 IPR009118 -
Lele10g0234 313 Gene3D Annexin 82 151 IPR037104 GO:0005509|GO:0005544
Lele10g0234 313 FunFam Annexin 1 81 - -
Lele10g0234 313 PANTHER ANNEXIN 8 308 - -
Lele10g0234 313 ProSitePatterns Annexin repeat signature. 256 308 IPR018252 GO:0005509|GO:0005544
Lele10g0234 313 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 SMART annex3 256 308 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 SMART annex3 182 233 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 SMART annex3 98 150 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 SUPERFAMILY Annexin 3 313 IPR037104 GO:0005509|GO:0005544
Lele10g0234 313 Pfam Annexin 247 308 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 Pfam Annexin 169 230 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 Pfam Annexin 96 150 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 FunFam Annexin 164 238 - -
Lele10g0234 313 ProSiteProfiles Annexin repeat profile. 239 310 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Lele10g0234 313 ProSiteProfiles Annexin repeat profile. 164 235 IPR018502 GO:0005509|GO:0005544
Lele10g0234 313 ProSiteProfiles Annexin repeat profile. 82 152 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0234 Lele-ChrLele10 1559863 1563584 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1309 29 19693263 19696782 Lele10g0234 10 1559863 1563584 CCT
Lele10g0234 10 1559863 1563584 Lele10g0234 10 1559863 1563584 ECH
Lele10g0234 10 1559863 1563584 Lele11g0247 11 2740721 2742503 hybridization
Lele10g0234 10 1559863 1563584 Lele12g1026 12 17818630 17820795 hybridization