Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0221 ATGGCTGCTCAGACACAGTTCCATGTTTTGGCTGTTGATGACAGTCTGATTGATAGAATGTTGATTGAGAGGCTCCTCAAAACCTCCTCTTATCATGTAACTGCAGTGGATTCTGGAATCAAGGCTTTGAAGTTTCTGGGTTTGCAAGAGAATGATGAAATCAAAGTAGAAACTGCCATTGTTGCTGCAGAAACCCATCAGGATTTGGAGGTAAATTTGATCATCACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTCACCAGAAAAATCAAGGAATCTAAATCTCTTAGAGATATACCTGTGGTGGTCATGTCGTCAGAGAATGTGCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCTGAGGAATTCTTGCTGAAACCCGTTCAGCAATCAGATGTAAACAGGCTCAAGCCTCTTTTGCTGAGATCAAAAGTTAAGGAAGAAGAAGAAGAAGACCAACTCATTAATAATAAAAGAAAAGTCATGGAAGAGATCCATTCTCAAGATAAATTTAGACCAAAAATATAG 537 0.3929 MAAQTQFHVLAVDDSLIDRMLIERLLKTSSYHVTAVDSGIKALKFLGLQENDEIKVETAIVAAETHQDLEVNLIITDYCMPEMTGYDLTRKIKESKSLRDIPVVVMSSENVPSRINRCLEEGAEEFLLKPVQQSDVNRLKPLLLRSKVKEEEEEDQLINNKRKVMEEIHSQDKFRPKI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0221 178 Coils Coil 147 167 - -
Lele10g0221 178 Pfam Response regulator receiver domain 9 136 IPR001789 GO:0000160
Lele10g0221 178 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 160 IPR045279 GO:0009736
Lele10g0221 178 Gene3D - 8 175 - -
Lele10g0221 178 SMART REC_2 7 143 IPR001789 GO:0000160
Lele10g0221 178 CDD REC_typeA_ARR 9 139 - -
Lele10g0221 178 ProSiteProfiles Response regulatory domain profile. 8 144 IPR001789 GO:0000160
Lele10g0221 178 SUPERFAMILY CheY-like 6 145 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0221 Lele-ChrLele10 1486454 1487681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0221 1 178 Response Regulator Gene Family AT3G57040 50.222 2.25e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele10g0221 Response_reg 2.4e-19 CL0304